| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5039 |
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| Symbol | |
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| ID | 5319088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1559239 |
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| End bp | 1560114 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640776820 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001313752 |
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| Protein GI | 150377156 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCCC AAATCGTAAG CGCGCTTAAG AGGCGCCGAC ACGGACCGGT CCTGACCGCG
TCCAAGCTGC TGCTGGCAAG CTACATCCTG GTTGCCATCG CTGCACCCCT AATCGCGCCG
CAAAACCCCT ATGACCCGCT GCAGATCTAC GGCTGGGAGG CGTCCTCGCC ACCCGGTACA
CGTGGCAGCG GCGGCTATCT CTACCTGCTT GGAACCGACG GTCTCGGCCG AGACATCGTC
AGCACCATTC TCTACGGCCT GCGGATCAGC CTGGTGGTGT CGATCGTCAG TAGCGCGCTC
GCGGCGCTGA TCGGGCTGAC CGCCGGCGTC AGTGCCGCAT ATTTCGGGAA ATGGGTCGAC
ATCGCGATTA TGCGGCTGGT CGACCTTCAG CTCAGCCTGC CGACGATCCT GATTGCGCTC
ATCGCCATCG TCACGCTCGG GCCGGGCATA GACCGTATCA TCCTGGCGTT GATCATCGCG
CAATGGGCGA CCTATGCCCG GATCGCCCGC GGCGTCGCAC TCAGCGAAGC GAACAAGCCT
TACATGGATG CGGCCCGCTT GATGCGGCTG CCAACGTCCC GGATCATCTT CCGCCACCTG
CTTCCGAACA GCATCGCGCC CGCCGTCACC TTGATACCGA TCGAGGTCGG CCATGCCGTC
GCACTCGAGG CGACCCTCTC CTTTCTTGGG CTGGGCGTCC CGATCGACAA GCCCTCGCTC
GGCTCAGCGG TCGCAAACGG GTTCCAGTAC CTCCTGACCG GCCAATACTG GATCAGCCTG
TTCCCGGGCC TCGCCCTCTT CGGCCTGATC GCCAGCATCA ATCTCGTCGG CGAAGACGTT
CGCCGCAGCC TCGATCCAAG GAACCATCCG CTATGA
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| Protein sequence | MKAQIVSALK RRRHGPVLTA SKLLLASYIL VAIAAPLIAP QNPYDPLQIY GWEASSPPGT
RGSGGYLYLL GTDGLGRDIV STILYGLRIS LVVSIVSSAL AALIGLTAGV SAAYFGKWVD
IAIMRLVDLQ LSLPTILIAL IAIVTLGPGI DRIILALIIA QWATYARIAR GVALSEANKP
YMDAARLMRL PTSRIIFRHL LPNSIAPAVT LIPIEVGHAV ALEATLSFLG LGVPIDKPSL
GSAVANGFQY LLTGQYWISL FPGLALFGLI ASINLVGEDV RRSLDPRNHP L
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