| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5028 |
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| Symbol | |
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| ID | 5318776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1549052 |
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| End bp | 1550515 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640776810 |
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| Product | hypothetical protein |
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| Protein accession | YP_001313742 |
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| Protein GI | 150377146 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.924524 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAGAG CCAATGTCAA ACGGGCTGCG GCCCTCGCCC TGCCACTTGT GCTCGGCGGC
TGCGTGTCCG CGAGCGAATA TGCAGCGAAG AACGCCGGGT TCTCCGCGGT CGAGGCCAAG
ACTGCCGAGG CCGTAAGAAA GCAGACGGTC TGGATACAGA ACCAGCAGCA CGCACGTGTC
GTATCCGACC GCGTGAAGAC GCTGATGGCT AAGAAAGCGA TCGATGTCGA GACGGCGGTT
CAGGTGGCAC TCCTCAACAA CAGGGGGCTG CAAGCCGCCT ACGCCGACTT GGGGGATTCC
GCTGCCGATG CCTGGCAATC GACGATGCTC GTCAATCCGA CGGTCTCGGT CGGCCTGACC
GGGATCGGCA CGCCGGGCCT CGAAGCATTC AAGTCGGTCG AAGGCATGAT CGCCAACAAC
ATCCTGGCGC TCGCCACGCG AGAACGGGAC ATCGCAATCG CCGACACCCG TTTCAGGCAG
GCACAGTTGA ACGCGGCACT GCGCACCCTG CAGCTCGCCG CCGACACGCG GCGCGCCTGG
ATCAATGCGG TTGCCGCCTG GGAAACGGTG GCCCAGCTCA ACCAGGCGCA GGCCGCAGCC
GACGCAGCGT CCGAGCTTGC CCAGGAGCTT GGCAAGAGCG GCGCACTCAC GAAAGAGGGG
CAGGCCCGCG AGCATGTTTT CTCTGCCGAA CTGGCGGGGC AGACGGCAAA GGCGAGGCTG
GAGGCAAGGC TCGCCAAGGA AGAGCTGACG CGGCTGATGG GCCTGTGGGG TTCGGGTATC
GACTATCAGG TTCCGAACCG TCTGCCGCCG TTGCCGAAGG GAATAATGAA GCGCGACCCG
ATCGAGGCGG AAGCATTGCA GCGCCGCGTC GATCTGCAGA TGGCGAAGCT CGACCTCGAA
GCGACCGCGA GATCCTACAA GCTGACGGAA GCGACCCGCT ACGTCACGGA CCTCGAACTC
CTCACGGGAT TCGAGACCGA GCGGGAACTC GAGGACGGCG ACATCAGGAG CGAAACGACC
GGACAGGCCG AACTCGAATT CGTCATTCCG ATCTTCGACA GCGGCAGAGC CCGCATGCGC
AAGGCGGAAC TTGCCTATAT GCGGGCGGCG AACCTCCTCG CGGAGAAGGC CGTCAACGTC
CGCTCGGAAG CGCGCTCGGC CTATCAGGCC TACCGCGCCA ACTACGACAT TGCCCGGCAC
TACCGCAAGA GCGTCGTGCC GCTGCGCACC AGGATCGCGG AGGAATCCCT CCTCACATAC
AACGCGATGA TCACCAACAC CTTCGAGCTG CTCGCCGACA GCCGCGAGAA GGTCAATGCG
AACCTGCTGG CCGTCAACGC CAAGCGCGAC TTCTGGCTGG CCGAAGCCAA TCTCGCCCCC
GCCGTCTACG GCGGCGGCGC GGGTGCCGCC GCCGTCGAAA TCGAAGTCGC GGCAGCCGCC
GAGAGCGGTG GTGGCGGCCA CTGA
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| Protein sequence | MMRANVKRAA ALALPLVLGG CVSASEYAAK NAGFSAVEAK TAEAVRKQTV WIQNQQHARV
VSDRVKTLMA KKAIDVETAV QVALLNNRGL QAAYADLGDS AADAWQSTML VNPTVSVGLT
GIGTPGLEAF KSVEGMIANN ILALATRERD IAIADTRFRQ AQLNAALRTL QLAADTRRAW
INAVAAWETV AQLNQAQAAA DAASELAQEL GKSGALTKEG QAREHVFSAE LAGQTAKARL
EARLAKEELT RLMGLWGSGI DYQVPNRLPP LPKGIMKRDP IEAEALQRRV DLQMAKLDLE
ATARSYKLTE ATRYVTDLEL LTGFETEREL EDGDIRSETT GQAELEFVIP IFDSGRARMR
KAELAYMRAA NLLAEKAVNV RSEARSAYQA YRANYDIARH YRKSVVPLRT RIAEESLLTY
NAMITNTFEL LADSREKVNA NLLAVNAKRD FWLAEANLAP AVYGGGAGAA AVEIEVAAAA
ESGGGGH
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