Gene Smed_5022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5022 
Symbol 
ID5318770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1544662 
End bp1545576 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content50% 
IMG OID640776804 
Producthypothetical protein 
Protein accessionYP_001313736 
Protein GI150377140 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.841987 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGGAC TGAAGGCTAA ACGGCATCTT ACGAGAGAAC TTGCTATCAC ACCTCCGTCA 
GGGGAGTTGA ACCGACACGG GATCGCAATT GTCGCCTGCG TCAAAAACGA GGCCAGTTAC
ATTGCGGAGT GGGTGCGCTT TCACCAAGCA GTTGGTGTTC GACATTTCCA TCTCTACGAT
GACGGCTCGA CTGATGGAAC GGTCGAGCTG CTTCAGCGGT CGCTGACCGG CCAAGAACTG
ACCGTCGTCC CTTGGAAAAT GCGCATGCGG GATGAAAAAA GTGGTGAGTT CTTGAACGGA
CAGACGATTG CTTTCGCCCA TGCGATCTTA AACTTCGGCG GTAAATATGA GCGTATGGCT
TTCATCGACG TTGATGAATT CTTATTGCCC AAGAAAGGTC GAACGTTAGA AGAGGCATTA
CGAGGAGCCA GCGGATTTCC TAACATCTCT TTACCCTGGC ATATGTTCGG CCATAGCGGT
CATGTCTCGC GACCAGCAGG GCCTGTATGC CTCAATTACA AAATGCGGGT CTCCGATCCC
ATGCAGCAGA ACCTCGACGC AAGCAATTTC AAATGCATTG TCGATCCGGT CGAAGTCACG
AAAGTTGGCG TGCATCATTT TCAAACACGT TCCTACGGCG ACGAAACCGC AAATGATTCG
GGGATGGTGG TGCCAAAGAA AAAGCGGAAG GCTGCCGAAT TTTACTCCGC AGAGTTCCTG
CAGCTCAATC ACTATTATGC GAAATCGATC GAGGAGCTGA AGGAAAAGAC AGACAGAGGT
TGGTCTTTCG ATGGTTCTGC AGAGAAATAC CGGAATAAAG TCACTTCCAC CATCACGTAT
ATCGAAGCGA ACGCCATCGA AGACCGGAGC ATGATCGATT TTGTCGACCA GAATGGGATC
GATCTCGGCC ACTGA
 
Protein sequence
MFGLKAKRHL TRELAITPPS GELNRHGIAI VACVKNEASY IAEWVRFHQA VGVRHFHLYD 
DGSTDGTVEL LQRSLTGQEL TVVPWKMRMR DEKSGEFLNG QTIAFAHAIL NFGGKYERMA
FIDVDEFLLP KKGRTLEEAL RGASGFPNIS LPWHMFGHSG HVSRPAGPVC LNYKMRVSDP
MQQNLDASNF KCIVDPVEVT KVGVHHFQTR SYGDETANDS GMVVPKKKRK AAEFYSAEFL
QLNHYYAKSI EELKEKTDRG WSFDGSAEKY RNKVTSTITY IEANAIEDRS MIDFVDQNGI
DLGH