| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5017 |
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| Symbol | |
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| ID | 5318756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 1539276 |
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| End bp | 1540769 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640776799 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001313731 |
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| Protein GI | 150377135 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.506364 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAGTC TGCTGGTTCG AAGACCGGAT CTCTTATACG TTCTGATCGC CGGCTATTGC
CTGCTGAGCG TCATCCTGAA AGTTCTTAGA CCGGACTCGC TTGAGATAGA CGAATCCGAG
CAAGCACTAC TCTCACAATA TCTGCTGCTC GGATACGGAG GCCAGCCGCC CTTCTACAAT
TGGCTTCAAT ATGGAGTCGT GGCTCTATTT GGTATCTCCG TCGCGTCGCT CGCCATTTTG
AAAAACGGTC TTCTGTTCCT CTTCCTCCTA CTCTACGGCC TTACGGCCCG CCTTCTCTCC
AGCAGTCCGC TCGCTCCGGC GGTGGCGGTG CTGGGCGTCC TCACGCTCCC ACCGGTTTTC
CTGCTGTCAC AGCGCGATTT ATCCCACACC GTCGCCGCGC TATTTGCCGT GTCGCTGTTC
CTTTACGGCT TTTTCCGTGC GCTAAAGAAC CCACCAAAGG TTGGCCACTA CTTGCTTGTC
GGTGTTGCTG TGGGGCTCGG GGCGATTTCG AAATACAATT TCGTTATCTT GCCGCTGGCG
GCACTGCTCG CCATCCTGCC AGAGGCGAAG CTGCGCAAAT ATCTGTTCGA CTGGCGGGTG
CTCGCCTCAG TTGCGGTTTG CGCAGTCATC GTGGCACCCC ATGCCTACTG GGTCGTCAAT
AATCTCGGAC ATGCCACCGG TGTCACTGTC GCTGAGATGA AGGAGGGGGC AGACAGCGCG
CTGCTGCCGC ACGCGATCCA AGGCCTTGTT TCGCTCGCGG TTGCGGCCCT CAAGGGCGTC
GCACTGACCT TTGCCGTCTT CGGATTGATC TTCTACGCGG ATGTTGGGAA AATCCTGTGC
GCCGAGAGCC TATGGACGAG GGTCGTCGGC AGGATGATTG TCGCCTGCTT CCTCATGATA
GCGTTTATCG TCGTAGCAAT GGATGCGACC CATATCCGTG CGAAGTGGTT GGCGCTTTTT
ACTGCGCTTC TCCCACTTTA TCTGACGCTG AAAATCGATG CCGCCGGCCT GGATCCTGCC
CGGCGCCTGC CGGCATTTTT TTCGATTTCG GGCATCCTCT CCGTCGGCGT CATCGTGATG
CTTTGGGCAA GGGTCTTTGT CGGACCAATG ATTGGCGATT ATTCCTTCGC GCACACGCCT
TACAGCGGTT TTGCCCGCAT GGTGCGCGCT GATCCGGGTC CGCCCCGGGT CGCCATCGTG
GTCGACGACA GGATCGTGGC GGGTAATCTC AGGATTCAGT TTCCCGATAC CCCGATCATC
CTGACCGGAT TTTCTCAGGA GGCGGAGAGA CACCTTCCCC CCGGTCGAAT TTTGGCGGCC
TGGTCGGCAG AAGGTAAGAG GCGAGCGGAG ATTCCTCCGC GCATTACGGG CCTACTGCAA
CTCATGCCCG TCAGGATCGC CGACGCCAAG CCGACGATCG TCTCAGTTCC TTACAACGCC
GGGCGCCCGG GCGACACATA CACTTTTGCC TATATTTGGG CGGACTTCCA CTGA
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| Protein sequence | MRSLLVRRPD LLYVLIAGYC LLSVILKVLR PDSLEIDESE QALLSQYLLL GYGGQPPFYN
WLQYGVVALF GISVASLAIL KNGLLFLFLL LYGLTARLLS SSPLAPAVAV LGVLTLPPVF
LLSQRDLSHT VAALFAVSLF LYGFFRALKN PPKVGHYLLV GVAVGLGAIS KYNFVILPLA
ALLAILPEAK LRKYLFDWRV LASVAVCAVI VAPHAYWVVN NLGHATGVTV AEMKEGADSA
LLPHAIQGLV SLAVAALKGV ALTFAVFGLI FYADVGKILC AESLWTRVVG RMIVACFLMI
AFIVVAMDAT HIRAKWLALF TALLPLYLTL KIDAAGLDPA RRLPAFFSIS GILSVGVIVM
LWARVFVGPM IGDYSFAHTP YSGFARMVRA DPGPPRVAIV VDDRIVAGNL RIQFPDTPII
LTGFSQEAER HLPPGRILAA WSAEGKRRAE IPPRITGLLQ LMPVRIADAK PTIVSVPYNA
GRPGDTYTFA YIWADFH
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