| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5011 |
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| Symbol | |
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| ID | 5318750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 1531199 |
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| End bp | 1533004 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640776793 |
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| Product | ABC transporter related |
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| Protein accession | YP_001313725 |
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| Protein GI | 150377129 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0190935 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACGTCA AGGATCGAAA AGAGCGCGAA GTTGATACCG AAACGATCAC TGGGATCCTA
AGGCGCGTCA TTGCCGAAAA CGGCCGCGAC CATATCCGCG GATATGCCTT TGCCATTGCC
TGCCTGATGG TCGTGGCTGC AACGACGGCT TTCACGGCGT GGGTCAGTGA AACTGTGGTC
AATGAAGCCT TCGCCAACAA GCGCGGCGAC GTCGTTCTAT TCGTCTGCTT CTCGATATTT
GCTGCCTTTG TGCTGAGAGG CCTGGCGACT TATGGGCAAG CCGTGGCTTT ATCAAAAATT
GGCAACAGCA TCGTCGCAAG CTATAAGCGC CGGCTTTATA CGCATCTGAT GGCGTTGAGC
ATTGGCTTTT TCCAGGAAAA GCGCTCCGCG CACCTCACCG CCAAGATTAA CCAGAACATC
TCCGGCATCC GCGACGTGCT CAACATGACA GTTACGTCGG TCGCCCGCGA TGTCCTGACT
CTGGTCGGTC TTGTCGGCGT GATGATAAGC AAGGACTGGC TGCTCTCGCT TATCACCTTC
TTGGGAGCGC CTCCGTTGCT CCTGGGGCTT CGGTACATTT CGAGGCGGCT GCGTCTGGCG
ACGCGCGAAG CGGTCGAGGC CAACAGCCGC GTGCTAGGCG CGATGCAGGA AACCATCCAG
GGCATTTCCA TTGTCAAAGC CTTCACGATG GAAGACGAGT TGGGCCGCAA GGTCGAAGGG
ATCATAAAGG GCGCGGAGAA CCGCGCCAAC CGCATCGCGC GCTTGAGCGA ACGGACGGCG
CCCTTGACGG AGACCTTTGC GGGCCTGGCG ATTTCGGGCG TGCTTGCCTA TGCGGCCTTC
CGCACCATCT ACAGCAACGT GGCCCCGGGT GCCTTGTTCG CCTTTGTAAC GGCGCTTCTC
CTGGCATACG ACCCGGTGCG ACGCTTGGCT CGCCTGCAGG TGTCCCTAGA GCGCGCTGCC
GTTAACGCCC GCATGCTTTA CGAAATTCTA GACACTGTCC CGCATCAACG GGACCTGCCC
GGTGCGAGTC GACTGGCCAT CACCGAAGCG ACCGTCGAGT TTCGCCACGT GCGGTTCTCA
TATGGCGATG GCGAGGAGGT GCTTAAGGGA GTTAGTTTCC TGGCGGAAGG TGGCAAGACC
ACCGCGCTTG TTGGCCCTTC TGGAGCCGGC AAATCGACGA TCATCAGCCT CATTCCACGC
TTCTACGATC CACAAACGGG TGTGATCCTG ATCGACGGGC AAGACATAGC CGCTGTTACC
AAGCAGTCTC TGCGCAACGG GCTCGCCTAT GTCTCACAAC AAGCTTACCT CTTTGAAGGT
TCTATCCGCG ATAACATCCG CTACGGCCGG CCCGAAGCGA CGGACGCGCA AGTAGAGGAA
GCGGCCCGGC TTGCCTATGC GCATGATTTC ATACTCGCGC AGCCACAGGG GTACGATACA
CCTGTGGGGG AACAGGGTAT GACGCTATCC GGCGGCCAGC GCCAGCGTCT CTCGATCGCG
CGAGCGCTCG TCCGCAACGC GCCCATTCTG CTTTTGGACG AGGCTACCTC GGCTCTTGAT
ACGGAATCGG AAGCAGCTGT CCAGAAGGCA CTAGATCAAG CGATGAGCGG CCGCACCGTC
ATTGTGATCG CTCACCGGCT TTCCACGGTC GTTAATGCCG ACAAGATCGT CGTGATGAAC
GAGGGGCTGG TCGTCGAGGA GGGGACGCAC GAGGAACTCG CGCGCCGCCC GGACGGCGTC
TACGCTCGCC TCCACAACAT CCAAGGTGGC TTTTTGGAAT TGACTGCAGG AGCCGATGCC
ACTTAG
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| Protein sequence | MNVKDRKERE VDTETITGIL RRVIAENGRD HIRGYAFAIA CLMVVAATTA FTAWVSETVV
NEAFANKRGD VVLFVCFSIF AAFVLRGLAT YGQAVALSKI GNSIVASYKR RLYTHLMALS
IGFFQEKRSA HLTAKINQNI SGIRDVLNMT VTSVARDVLT LVGLVGVMIS KDWLLSLITF
LGAPPLLLGL RYISRRLRLA TREAVEANSR VLGAMQETIQ GISIVKAFTM EDELGRKVEG
IIKGAENRAN RIARLSERTA PLTETFAGLA ISGVLAYAAF RTIYSNVAPG ALFAFVTALL
LAYDPVRRLA RLQVSLERAA VNARMLYEIL DTVPHQRDLP GASRLAITEA TVEFRHVRFS
YGDGEEVLKG VSFLAEGGKT TALVGPSGAG KSTIISLIPR FYDPQTGVIL IDGQDIAAVT
KQSLRNGLAY VSQQAYLFEG SIRDNIRYGR PEATDAQVEE AARLAYAHDF ILAQPQGYDT
PVGEQGMTLS GGQRQRLSIA RALVRNAPIL LLDEATSALD TESEAAVQKA LDQAMSGRTV
IVIAHRLSTV VNADKIVVMN EGLVVEEGTH EELARRPDGV YARLHNIQGG FLELTAGADA
T
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