| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5008 |
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| Symbol | |
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| ID | 5318657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1525936 |
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| End bp | 1526967 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640776790 |
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| Product | regulatory protein LacI |
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| Protein accession | YP_001313722 |
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| Protein GI | 150377126 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0284302 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAGAC GGCCGACGAT TGCGGATCTG GCCCGCGCAT CAGGCGTGAG CGTTGCAACG
GTCGATCGCG TGCTGAACGG CCGTCATCCG GTGCGCGAGG AAACGGCGCG CCGCGTCTAC
GATGCGGCGA AGGCGATCGG CTACCACGCG GTCGGCCTGC TTCGCCAACG GGTTTTCGAG
GACCTGCCGC AATTTCGGCT CGGCTTTCTC CTGCAGAAGC CGGAGCAATC ATTCTACAAG
GCGCTCGCAA AGGAGATCGA AAACGCGGCC CTTGCGGTGA CGCATGTGCG TGCCGTTCCG
CAGGTGGATT TCGTCGCAAG CTCCACGCCG CAAGGGATCA TCGAAAAGTT GAAGGCCATG
GCGGCGCGCA ATCAGGCGAT CGCCCTGGTG TCGCCGGATT ATCCGGCCGT GACCGCCGCG
GTCGAGGACC TCAGGGATCG CGGCATTCCC GTCGTCGCAC TGCTTTCCGA CTTTGCCGCC
GGCGTGCGCG AGGCCTATGT GGGCCTCAAC AATCAGAAGG TCGGCAGAAC GGCGGCATGG
ATGATCGCCA AGGCGGCGAA GCGTCCGGGA AAGGTCGCCG CCTTCGTCGG CAGCCACCGC
TTCCATGGAC ACGAGCTGCG CGAGATCGGC TTTCGTTCGT ATTTTCGCGA AAACGCACCC
GAGTTCGAAG TCCTCGACAC GATGGTGAAC CTCGACACGC CCGAGATCAC CCATGAGGCA
ACGCTCGATC TCCTGCAACG CCACCCCGAT GTCCTCGGTT TCTACGTCTG TGGCGGCGGC
ATGGAGGGTG CCATTTCGGC GATCCGGGAG GAAAGGCTCG AGGGCAAGCT GCTCGTGGTC
GTCAACGAGC TGACGCCGGA ATCGCGCGCG GCACTCGCCG ATGAAACATT GCTTATGGCG
ATCTCGACGC CCGCCTCGGC ATTGGCCCGG GAATCGGTGA GCCTGATGAT CGGCGCGATC
GACCGGGAGG CCGCGAGCGT GCCCGGCCAA ACCTTCCTGC CCTTCGACAT CTACACGCCC
GAGAACATCT GA
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| Protein sequence | MTRRPTIADL ARASGVSVAT VDRVLNGRHP VREETARRVY DAAKAIGYHA VGLLRQRVFE
DLPQFRLGFL LQKPEQSFYK ALAKEIENAA LAVTHVRAVP QVDFVASSTP QGIIEKLKAM
AARNQAIALV SPDYPAVTAA VEDLRDRGIP VVALLSDFAA GVREAYVGLN NQKVGRTAAW
MIAKAAKRPG KVAAFVGSHR FHGHELREIG FRSYFRENAP EFEVLDTMVN LDTPEITHEA
TLDLLQRHPD VLGFYVCGGG MEGAISAIRE ERLEGKLLVV VNELTPESRA ALADETLLMA
ISTPASALAR ESVSLMIGAI DREAASVPGQ TFLPFDIYTP ENI
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