| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4995 |
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| Symbol | |
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| ID | 5318716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1509578 |
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| End bp | 1510237 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640776777 |
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| Product | ABC transporter related |
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| Protein accession | YP_001313709 |
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| Protein GI | 150377113 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0209263 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGGT TCGAGCAGGC GACGAAATAC GCCCGCACCA AGGGCATCAA GAAGCCGATC
ATCGAAGATG CCTCGCTGAC ACTCAACCGC GGCAAGAGCG TCGGCCTGCT CGGCCGCAAC
GGCGCCGGCA AATCGACGCT GCTGCGGCTG ATCGCCGGCG CGATCAAGCT CGACGGCGGT
CGAATCATCC GCCGCGGCAA GATTTCCTGG CCGCTCGGAT TCGCCGGCAG CTTCCAGAGC
TCGATGACCG GCGAACAGAA TGTGCGTTTC GTCGCCCGTA TCTACGGTGT GAATACAGAG
CAACTGATCG CCTATGTCGA GGATTTTGCA GAGCTTGGCC CCTTCTTCAA GGCGCCGGTC
GGCACCTATT CCTCCGGAAT GAAGGCGCGC CTTGCCTTTG GGTTGAGCAT GGGCGTCAAC
TTCGACTATT ATCTCGTCGA CGAAATCACC GCCGTTGGTG ATACAAATTT TAAGAAGAAG
TGTCAGGCTG TATTCGAAAC TAGGCTACAG GACTCGGATG TGGTCATGGT CTCGCACAGC
ACCGGTACGA TCCGCGACTA TTGCGATTGC GGTGTGGTGC TGGAAAAAGG CAAGATGACC
TATTATGAGA ATGTCGAAGA CGCAATACGC GCGCACGACA AGAACATGAA GGAAAGCTAA
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| Protein sequence | MIRFEQATKY ARTKGIKKPI IEDASLTLNR GKSVGLLGRN GAGKSTLLRL IAGAIKLDGG
RIIRRGKISW PLGFAGSFQS SMTGEQNVRF VARIYGVNTE QLIAYVEDFA ELGPFFKAPV
GTYSSGMKAR LAFGLSMGVN FDYYLVDEIT AVGDTNFKKK CQAVFETRLQ DSDVVMVSHS
TGTIRDYCDC GVVLEKGKMT YYENVEDAIR AHDKNMKES
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