| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4988 |
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| Symbol | |
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| ID | 5318801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1502162 |
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| End bp | 1503064 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640776770 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001313702 |
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| Protein GI | 150377106 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.373349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0028645 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCTCGG GACGGCGGCG CCTGCCTTCG ACCACAGCAC TTCAGGTCCT GCTTGCGGTG
GCCGAAAGGG GCTCGACGAG CGCTGCCGCC GAAAGCACGT CGCTCTCGCA AAGCGCCGTC
AGCAAGCAAT TGCTGGCGCT TGAAGCGCTG ATCGGCAGTT CCGCCTTCGC CCGGACATCG
CGCGGCATGA TCCCGACCGA GGTCGGCTCG ATCTATATCG AACAGGCGCG CATTGCCTTG
AAGGCAATTG AGGACGCCGC GCTGCGGGTC GCGCGCCTGA AGCCGGGGCC GCGCGTTCTT
CGCCTGCAGG TGCCGCCCAT CTTCGGAGAC CGATGGTTGC TGCCGCGCTT CCTTCGTTTC
ACCGAGCAAC ACCCCGAGAT CGAGGTGCAG TTCACCACCT TCGTGTCTCC GACCCAGTCC
GAGACGCCCG ATGCGATATT CCGATTCCTG ACCGAACCCT TGCCGGGCGA GGAGACCAGC
TACCTCTTCG GGCGCGAGGT TCTGGTCGTC AGCGCCCCTT CCTACTGGGA GAAGAACGGA
ACTCCGGAAA CCATCGAGGA GCTGGCGGAT GGCGTCATGC TCGAGCATCC GCAAACGCCG
TTGCACTGGC ACTATTTCGC CGATAGCCAC GGAAAGCGCG AACTCCCCGT GCGCCACACG
ACGCGCTTCG GCTATTACAC CATGGTGATC CGCGCGGCGC TTGCCGGACA GGGAATGGCC
TTGATCCCGC GCGGCCTTAT CCTCGACGAC CTTGCCGCCG GAAAGCTCGT CAATCCGAAC
GGCTTCGGAT ATCGAAGCGA ATACGGCTAC TGGTTCGCAA AGCCGCGGGA CATTGCACCA
AGTGCGTCCA TGCGCATTTT CGAAACATGG CTGATGGCGG AAGCGGAAGG CATGGGCGAT
TGA
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| Protein sequence | MASGRRRLPS TTALQVLLAV AERGSTSAAA ESTSLSQSAV SKQLLALEAL IGSSAFARTS
RGMIPTEVGS IYIEQARIAL KAIEDAALRV ARLKPGPRVL RLQVPPIFGD RWLLPRFLRF
TEQHPEIEVQ FTTFVSPTQS ETPDAIFRFL TEPLPGEETS YLFGREVLVV SAPSYWEKNG
TPETIEELAD GVMLEHPQTP LHWHYFADSH GKRELPVRHT TRFGYYTMVI RAALAGQGMA
LIPRGLILDD LAAGKLVNPN GFGYRSEYGY WFAKPRDIAP SASMRIFETW LMAEAEGMGD
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