| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4979 |
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| Symbol | |
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| ID | 5318792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 1492278 |
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| End bp | 1493597 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640776761 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001313693 |
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| Protein GI | 150377097 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.336131 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.060129 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGGC TGCTTTCCGG CGTATCGGCC GGTGTAATCA TGCTTGTCTG CGCTATGGGG
GCGGCAAGTG CCGCTGACCT GCCGGGCAAG TTCGAGGGTG TTACCATCGA CGCCAAGCTG
ATTGGCGGCC AGCAATATGA AAAGCTCTAC GAGCGCATCG GCGAATGGGA GAAGGCGACC
GGCGCCAAGG TCAACATTCT GTCGAAGAAG AACCACTTCG AACTCGACAA GGAGATCAAA
TCCGACATCG CCACCGGCGG CATCACCTGG TGCATCGGTT CGAATCATTC CTCATTCGCA
CCGCAATATC CGGATATCTA CGCCGATCTT TTCGGCCTCG TCCCGTCCGA GGAGGTCGCC
AGGTTCGTGC CGGCCGTGAT CGATGCCTCG ACGCTCGAGG GCAAGCTTGT CATGCTGCCG
CGGGCGCAAT TCGACGTCTC GGCACTCTAT TACCAGAAGA GCCTTTATCA GGACGAGGCG
AAGAAGGCCG AGTTCAAGGC CAAGTACGGC TATGATCTCG CACCGCCCGA CACCTGGGCT
CAGGTGAGCG ATCAGGCGGA ATTCTTCGCC GCGCCGCCGA ACTTCTACGG CACGCAGTTC
GCCGGCAAGG AGGAAGCGAT CAACGGCCGC TTCTACGAGA TGCTGGTCGC CGAGGGTGGA
GAATATCTCG ACAAGGACGG CCGACCGGCG TTCAATTCGG AAGCGGGCGT GCGCGCCCTC
GATTGGTTCG TCAAGCTCTA CAAAAGCAAA GCGGTTCCGC CGGGCACCAC CAACTATCTC
TGGGACGATC TCGGCCAGGG CTTCGCTTCG GGCTCGATCG CGGTCAATCT CGACTGGCCT
GGCTGGGCGT CCTTCTTCAA CGATCCGAAA TCCTCGAAGG TTGCCGGCAA TGTCGGGGTG
AAGGTTCAGC CGGCCGGGTC GTCCGGCAAG CGCACCGGCT GGTCCGGGCA TCACGGCTTT
TCGGTAACGG AGTCCTGCGG GAGCAAGGAG GCAGCCGCCT CGCTCGTCTG GTGGCTGACC
AACGAAGACA GCCAGATGCT CGAATCCGCA GCCGGCCCTC TTCCGACCCG CAGCGCCGTA
TGGGATCACA ACATCAAGGC CGCCGAGGGC GACGCCTACA AGACCGAGGT GCTGCAGGCC
TTCCAGGAGG CAGCAAAGCA CGCCTTCCCG GTTCCGCAGA CGGCCGAGTG GATCGAGATA
TCCAATGCCG TCTATCCGGA GCTTCAGGCG GCCATCCTCG GCGACAAGAC GTCGAAGGAA
GCGCTCGATG CTGCCGCCGA AAAGGCGACC GGCATCCTCG AAGACGCCGG CAAGCTCTAG
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| Protein sequence | MNRLLSGVSA GVIMLVCAMG AASAADLPGK FEGVTIDAKL IGGQQYEKLY ERIGEWEKAT
GAKVNILSKK NHFELDKEIK SDIATGGITW CIGSNHSSFA PQYPDIYADL FGLVPSEEVA
RFVPAVIDAS TLEGKLVMLP RAQFDVSALY YQKSLYQDEA KKAEFKAKYG YDLAPPDTWA
QVSDQAEFFA APPNFYGTQF AGKEEAINGR FYEMLVAEGG EYLDKDGRPA FNSEAGVRAL
DWFVKLYKSK AVPPGTTNYL WDDLGQGFAS GSIAVNLDWP GWASFFNDPK SSKVAGNVGV
KVQPAGSSGK RTGWSGHHGF SVTESCGSKE AAASLVWWLT NEDSQMLESA AGPLPTRSAV
WDHNIKAAEG DAYKTEVLQA FQEAAKHAFP VPQTAEWIEI SNAVYPELQA AILGDKTSKE
ALDAAAEKAT GILEDAGKL
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