| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4969 |
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| Symbol | |
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| ID | 5318032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 1483388 |
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| End bp | 1484665 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640776751 |
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| Product | mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_001313683 |
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| Protein GI | 150377087 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.428522 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0904039 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCA TAACAGACCT GCGCGTCTTC GACCTGCGCT TCCCGACCTC CGCAAGCCTT
GATGGCTCGG ATGCCATGAA CCCGGACCCG GACTATTCGG CGGCCTACGT CATCCTCGAT
ACCGATCGCC CAGGGCTGGC GGGGCACGGC CTCACCTTCA CCATCGGGCG CGGCAATGAC
GTCTGCTGCA TGGCTATCCA GGCCATGCGG CATCTCGTCG TCGGTCAGGA CATTGGAGAT
ATTCTGAAAC ATCCCGGTCG CTTCTGGCGG CACCTGACCA GCGACAGCCA GTTGCGCTGG
ATCGGACCCG AAAAGGGCGC AATCCATCTT GCGACCGGGG CAATCGTCAA CGCGATCTGG
GACCTCCTTG CGAAGGACGC CGGCAAGCCG GTATGGCGGC TCGTCAGCGA GATGTCGGCG
GAAGAGATCG CCGACATCGT CGACTACCGT TACATCACGG ATGTGCTTAC CCGCGACGAG
GCGATCGAGA TTTTGCGGCG GGCCGAAACC GGCAAGGCCG ACCGGATCGC CGCGCTCGAG
AAGGAGGGCT ATCCCTGCTA CACGACCTCG GCGGGTTGGC TCGGTTATGA CGACGAGAAG
CTCCGGCGGC TTGCGCAGGA GGCAGTCGAC GCAGGCTTCA ACCATATCAA GATGAAAGTC
GGCCGCGATC TCGCCGACGA TATGCGCCGG TTGAGGATCG CCCGTGAAGT GATCGGCCCC
GACAGATATC TGATGATCGA CGCGAACCAG GTCTGGGAAG TCGGCGAGGC GATCGACTGG
GTGCAGAAGC TCGCTTTCGC CAAACCCTTC TTCATCGAGG AGCCGACGAG CCCCGACGAC
GTAGCCGGGC ATCGCAAGAT CCGCGAGGCG ATCGGGCCGG TCAAGGTCGC AACCGGTGAG
ATGTGCCAGA ACCGTATCAT GTTCAAGCAG TTCATCGCCG AGGGTGCGAT CGACATCGTG
CAGATCGATT CCTGCCGGAT GGGTGGGCTC AACGAGGTTC TGGCCGTGCT TCTGATCGCT
GCCAAATACG GGCTTCCCGT ATGGCCGCAC GCCGGTGGGG TCGGTCTCTG CGAATATGTG
CAGCACCTGT CGATGATCGA CTACGTCGCC GTTTCCGGTA CGAAAGACGG CCGGGTCATC
GAATATGTCG ACCACCTGCA CGAGCACTTC CTGGATCCGT GCGTCATCAG CGACGCTGCC
TATATGCCGC CGTCCCGACC CGGATTCTCG ATTGAGATGA AGGAAAAGTC GATTGAGGAT
TATACGTTTC GCGGCTGA
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| Protein sequence | MTRITDLRVF DLRFPTSASL DGSDAMNPDP DYSAAYVILD TDRPGLAGHG LTFTIGRGND
VCCMAIQAMR HLVVGQDIGD ILKHPGRFWR HLTSDSQLRW IGPEKGAIHL ATGAIVNAIW
DLLAKDAGKP VWRLVSEMSA EEIADIVDYR YITDVLTRDE AIEILRRAET GKADRIAALE
KEGYPCYTTS AGWLGYDDEK LRRLAQEAVD AGFNHIKMKV GRDLADDMRR LRIAREVIGP
DRYLMIDANQ VWEVGEAIDW VQKLAFAKPF FIEEPTSPDD VAGHRKIREA IGPVKVATGE
MCQNRIMFKQ FIAEGAIDIV QIDSCRMGGL NEVLAVLLIA AKYGLPVWPH AGGVGLCEYV
QHLSMIDYVA VSGTKDGRVI EYVDHLHEHF LDPCVISDAA YMPPSRPGFS IEMKEKSIED
YTFRG
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