Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4965 |
Symbol | |
ID | 5318480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 1479172 |
End bp | 1479723 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640776747 |
Product | dehydratase |
Protein accession | YP_001313679 |
Protein GI | 150377083 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2030] Acyl dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.696873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0181187 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGAGT TTATGCCCAC CGTCGGAGTT TCGTCGACGC ATCCCGCCGA CATGCCGGAC GATCACGCCG CTCTGCCCGT GTGGAACGCG GAAAACTGGT TCTATGAAGA TTGGCCCATC GGTCAGCGTA TCCGGTCGCT GCGTCGGACG ATCGGCGAGA GCGATAGCCA TCTCTTCAAT ACACTTGTCA TCGATATCCA TCCTTATGTT CAGGATCGGA TGTTCGCGGA ACGGGAAGGA ATATTTGGCC GTCGCCTCGT CGCCGGCGCC TTCGTGTTCT CGGCCGGTCT CGGCCTCGTC GCGACCAACT GCGTGAACGC TTTTTCCTAC GGCTACGACA AGCTGCGCTT TATCAAGCCG GTCTTCATCG GTGACACGAT TTACACGATC CGGACCAACA TGGAGAAGGT GCCCCGTTAC AAAGACCTCG GCCTCATTCG CGCCAGCTAC CAAGTCTTCA AGAACGAAGG TGAACTGGTT CTCTACTGCG AGCACCTGCA AACCGTGAAG TACCAGAACC CGGCCGATTT CGTTGGCAAG ACCGAAAGGT AG
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Protein sequence | MDEFMPTVGV SSTHPADMPD DHAALPVWNA ENWFYEDWPI GQRIRSLRRT IGESDSHLFN TLVIDIHPYV QDRMFAEREG IFGRRLVAGA FVFSAGLGLV ATNCVNAFSY GYDKLRFIKP VFIGDTIYTI RTNMEKVPRY KDLGLIRASY QVFKNEGELV LYCEHLQTVK YQNPADFVGK TER
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