Gene Smed_4940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4940 
Symbol 
ID5318267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1450273 
End bp1451187 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content57% 
IMG OID640776723 
Producthypothetical protein 
Protein accessionYP_001313655 
Protein GI150377059 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.234076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.439093 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAGG CAAATTCACA CGATCGACAC CTGGACAACA TCCCCTTGGC GGTCGGGGTG 
ATCATCCTGA CCGTTCTGGC ACTTTCGTTG GGCGACGCGC TGATCAAGAT GTCCAGTGGC
AGCTTCGTCA TCTGGCAGAT ATTTGTCATC CGCTCGATGA TTGCGATCCC CGTGTTGCTC
CTGATTCTGA TCATGGCGGC ACCCGACACG TTGCGTATGC CAGATGACCT TGTCTGGATC
ATTTTGCGCA GTCTGATGCT AGTAGCAATG TGGGTCTGCT ATTACGTGTC CCTACCAAAG
TTGACACTTT CGGCCGCTGC GGCTGCCTAT TACACGCTGC CCATCTTCAT CACCCTTTTT
TCCGCCCTGT TCATCGGCAG CAAGATTTCG CAAAAAGGCT GGCTCGCCGT CTTTGCTGGA
TTTTCGGGCG TGGTCTTGAT CCTGCGCCCC AAGGCCGGCG ACTTCAACGC ATACGCTGTC
TTACCGCTTG CCTCGGCGAT GCTCTATGCG GCAGCGATGA TCCTGACACG CACCAGATGC
CGCAACCAAC ACCCGGTCAT TTTGTCGCTG GCGCTGAACG CCGCCTTTGT CATCGTCGGT
GTGGCGGCCG CGAGCCTGAT CCCGCTGCTA CCCGACACGG CACGGCAGGG CTTTTTGCTT
GCGCCCTGGG CGGCGATGGG ATGGAGCGAA TGGATTTCGA TGATGCTTTT GGCTGGTGTA
ATCCTGACCG GCAGCATCGG TGCGGCTATC GCCTATCAGA ACGGCCCGCC TGCCATGATC
GGTGCCTTCG ACTTCGCTTA TGTCGGATTC GCTGTCATTT GGGGGATCGT TTTCTTCGCT
GAGGTGCCGG ACACGAGTTC CGTACTCGGC ATTGGCTTGA TTGTCAGCGC GGGGATATTG
TCCCTGCGCC AATAA
 
Protein sequence
MQQANSHDRH LDNIPLAVGV IILTVLALSL GDALIKMSSG SFVIWQIFVI RSMIAIPVLL 
LILIMAAPDT LRMPDDLVWI ILRSLMLVAM WVCYYVSLPK LTLSAAAAAY YTLPIFITLF
SALFIGSKIS QKGWLAVFAG FSGVVLILRP KAGDFNAYAV LPLASAMLYA AAMILTRTRC
RNQHPVILSL ALNAAFVIVG VAAASLIPLL PDTARQGFLL APWAAMGWSE WISMMLLAGV
ILTGSIGAAI AYQNGPPAMI GAFDFAYVGF AVIWGIVFFA EVPDTSSVLG IGLIVSAGIL
SLRQ