Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4940 |
Symbol | |
ID | 5318267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 1450273 |
End bp | 1451187 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640776723 |
Product | hypothetical protein |
Protein accession | YP_001313655 |
Protein GI | 150377059 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.234076 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.439093 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCAGG CAAATTCACA CGATCGACAC CTGGACAACA TCCCCTTGGC GGTCGGGGTG ATCATCCTGA CCGTTCTGGC ACTTTCGTTG GGCGACGCGC TGATCAAGAT GTCCAGTGGC AGCTTCGTCA TCTGGCAGAT ATTTGTCATC CGCTCGATGA TTGCGATCCC CGTGTTGCTC CTGATTCTGA TCATGGCGGC ACCCGACACG TTGCGTATGC CAGATGACCT TGTCTGGATC ATTTTGCGCA GTCTGATGCT AGTAGCAATG TGGGTCTGCT ATTACGTGTC CCTACCAAAG TTGACACTTT CGGCCGCTGC GGCTGCCTAT TACACGCTGC CCATCTTCAT CACCCTTTTT TCCGCCCTGT TCATCGGCAG CAAGATTTCG CAAAAAGGCT GGCTCGCCGT CTTTGCTGGA TTTTCGGGCG TGGTCTTGAT CCTGCGCCCC AAGGCCGGCG ACTTCAACGC ATACGCTGTC TTACCGCTTG CCTCGGCGAT GCTCTATGCG GCAGCGATGA TCCTGACACG CACCAGATGC CGCAACCAAC ACCCGGTCAT TTTGTCGCTG GCGCTGAACG CCGCCTTTGT CATCGTCGGT GTGGCGGCCG CGAGCCTGAT CCCGCTGCTA CCCGACACGG CACGGCAGGG CTTTTTGCTT GCGCCCTGGG CGGCGATGGG ATGGAGCGAA TGGATTTCGA TGATGCTTTT GGCTGGTGTA ATCCTGACCG GCAGCATCGG TGCGGCTATC GCCTATCAGA ACGGCCCGCC TGCCATGATC GGTGCCTTCG ACTTCGCTTA TGTCGGATTC GCTGTCATTT GGGGGATCGT TTTCTTCGCT GAGGTGCCGG ACACGAGTTC CGTACTCGGC ATTGGCTTGA TTGTCAGCGC GGGGATATTG TCCCTGCGCC AATAA
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Protein sequence | MQQANSHDRH LDNIPLAVGV IILTVLALSL GDALIKMSSG SFVIWQIFVI RSMIAIPVLL LILIMAAPDT LRMPDDLVWI ILRSLMLVAM WVCYYVSLPK LTLSAAAAAY YTLPIFITLF SALFIGSKIS QKGWLAVFAG FSGVVLILRP KAGDFNAYAV LPLASAMLYA AAMILTRTRC RNQHPVILSL ALNAAFVIVG VAAASLIPLL PDTARQGFLL APWAAMGWSE WISMMLLAGV ILTGSIGAAI AYQNGPPAMI GAFDFAYVGF AVIWGIVFFA EVPDTSSVLG IGLIVSAGIL SLRQ
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