| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4892 |
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| Symbol | |
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| ID | 5318230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 1402319 |
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| End bp | 1403518 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640776677 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001313609 |
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| Protein GI | 150377013 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.563893 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCCG GAATCCCCGC AGGCATCGTC GCCGCACTCG GGCTCACCCA GATCGTCGGC
TACGGAACGC TTTACTACAG CTTCAGCATC CTTGCGCCCG GAATGGCGCG CGACCTTGGC
CAGACTGTCG AGCAAGTGTT TGCCGTGTTC TCCGCTTCGT TGCTGGTGGG CGGCCTTTCG
GCTCCGATCA TGGGCGGTTG GATGGATCGG TTCGGTGCCG CGACGATCAT GACTTTTGGT
TCGGCCGTCT CCGCCGTGGC GCTTTTATTG TGCGCATGGT CTCCTTCGAT GCCGGTGTTC
GCCATAGCCA TCGTTCTTTT GGAGGTGGCG TCCGGCATGG TGCAATATCA GGCAGCCTTT
GCGACGCTCG TGGAAGTCCG CCCCAAGATG GCCTCGCGCA GTATCACCTA TCTGACGCTG
ATCGGGGGTT TCGCCTCGAC GATCTTCTGG CCGATTGCCG TGAACCTGAG TGAGCTTCTC
TCATGGCGTG AGATCTACGT CGCCTATGCG GGGTTGAACC TGCTCATCTG TCTTCCACTG
CATTACTGGA TTCTGCGAAG CAGGAAGCAC GGGGCGGTCG AACGTTCTCG CATCGATGGA
GAGGCTATCG CCGGAGCGCT TCCAACACGG GTGAGGCGGC GGGGCATGCT CCTTGTTTCA
TGGGCCTTTG CCCTCCAGGG GTTCACCCTT TCAGCAATAT TGACACATAT GGTACCGATG
CTCGGAGCAA TCGGGTTCGG GCCGGCAGCC GTCGTGATAG GGTCGCTGTT CGGACCGTCT
CAAGTTCTGA GCAGGCTGAT CAACATGACG CTAGGCGCTA ACCTGCTGCC GCCCATGCTC
GCGACGCTAT CGGCCGTGCT GATCGTCGCC GGTGTCGTCG TACTCGGTCT TTCCGGGACA
TGGCTACCCG GGGCCGTGGC TTTCGCGATT TGCCTCGGTC TTGGATCGGG CATCAACAGC
ATTGCGCAGG GCTCGCTTCC GCTCTGGCTG TTCGGATCCT CCGGCTATGG AGCCATTACG
GGCCGGATGG CCGCCGCTCG GCTGGCTGCA GCCGCCATGG CCCCCTTTGT CTTTTCCGTC
CTGATGGAAC GGTTCGGCAC CAATGTCGCC CTGATGGCCA ATGCCTGCCT GGGTGCGATC
GGTATAGCGG CATTCGTCGC GGTAGCCTCG GCGGCCAAAC GTCAGCCGGG TGCGCACTAG
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| Protein sequence | MKSGIPAGIV AALGLTQIVG YGTLYYSFSI LAPGMARDLG QTVEQVFAVF SASLLVGGLS
APIMGGWMDR FGAATIMTFG SAVSAVALLL CAWSPSMPVF AIAIVLLEVA SGMVQYQAAF
ATLVEVRPKM ASRSITYLTL IGGFASTIFW PIAVNLSELL SWREIYVAYA GLNLLICLPL
HYWILRSRKH GAVERSRIDG EAIAGALPTR VRRRGMLLVS WAFALQGFTL SAILTHMVPM
LGAIGFGPAA VVIGSLFGPS QVLSRLINMT LGANLLPPML ATLSAVLIVA GVVVLGLSGT
WLPGAVAFAI CLGLGSGINS IAQGSLPLWL FGSSGYGAIT GRMAAARLAA AAMAPFVFSV
LMERFGTNVA LMANACLGAI GIAAFVAVAS AAKRQPGAH
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