Gene Smed_4869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4869 
Symbol 
ID5318916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1371590 
End bp1372624 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content64% 
IMG OID640776654 
Productphosphate acetyltransferase 
Protein accessionYP_001313586 
Protein GI150376990 
COG category[C] Energy production and conversion 
COG ID[COG0280] Phosphotransacetylase 
TIGRFAM ID[TIGR00651] phosphate acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.70933 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCTC TCGACCGGAT TATCGAAACG GCAAGGAAAG CCCCGCGACA CATTGTTCTC 
TCCGAAGGGG AGGACCCGCG GATCGTCGCC GGCGCCGTAC GTGCGAGGCG GGAATGTCTG
GCGGAGATCA CGCTCGTCGG AAACCGCGAG GTGGTCATGC ACAGGCTCGC AGCTCTGGAT
GCAAACCCGC GAGAATTCCG GGTGGAGGAC CCGTCCTCCT CGTCGCTCAC CGACGGTTTC
GCGGCTTCCT TTCTCGACCT CAGAAGGAGC AAAGGCGTCG ACGAGGCCGC GGCTCGGGTG
GCGGTGCTCA CGCCACTGAA CTTCGCCGCG ATGATGGTGA GGGAAGGGCT GGCCGACGGA
ACCGTCGGCG GTGCGGTCGC GACCACCGCC GATACCGTGC GCGCCGCCCT GCAGGTGATC
GGTAGGGCGC CCGGCGTCGG GCTCGTCTCC AGCTTCTTTC TGATGATGCT CTGCGAACCG
CATCACGCCC GCAAGGGTGC CTTCGTCTTC GCCGATTGCG GACTGGTGGT GGATCCCGAT
GCAGGCGGCC TTGCCGACAT CGCGCTTATG TCCGCGAAAT CCTATGAGCA GCTTGCCGGC
GAGCGGGCTA AAGTCGCCAT GCTCTCTTTC TCGACCGGCG GCAGCGCCGC TCATGAGCGC
GTTTCGAAGG TCGTCGAGGC CACCCGCATG GCGCGATGCG CTGAGCCCGA TCTCGTTATA
GACGGGGAAT TGCAGTTCGA CAGCGCCTTC GTCGAAGCCG TCTCCCTGAC CAAGGCGCCG
CAATCCGCGT TGCGCGGGGA GGCCAATGTT TTCGTGTTCC CGAATCTCGA CGCGGCAAAT
ATCGGTTACA AGATCGCCCA GCGGATCGGC GGAGCGACGG CGATCGGGCC AATTCTGCAG
GGACTGGCAC GGCCGGCCAA CGATCTTTCG CGGGGCTGCA GTGCCGACGA CGTCTTCCAC
ATGATTGCGG TTACAGTCGT CCAGGGGCGT GAGGACAACT CCACCGTTTC CGAAAGGCGT
CAAAACGTCA CATAA
 
Protein sequence
MKPLDRIIET ARKAPRHIVL SEGEDPRIVA GAVRARRECL AEITLVGNRE VVMHRLAALD 
ANPREFRVED PSSSSLTDGF AASFLDLRRS KGVDEAAARV AVLTPLNFAA MMVREGLADG
TVGGAVATTA DTVRAALQVI GRAPGVGLVS SFFLMMLCEP HHARKGAFVF ADCGLVVDPD
AGGLADIALM SAKSYEQLAG ERAKVAMLSF STGGSAAHER VSKVVEATRM ARCAEPDLVI
DGELQFDSAF VEAVSLTKAP QSALRGEANV FVFPNLDAAN IGYKIAQRIG GATAIGPILQ
GLARPANDLS RGCSADDVFH MIAVTVVQGR EDNSTVSERR QNVT