Gene Smed_4856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4856 
Symbol 
ID5318261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1357691 
End bp1357942 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content58% 
IMG OID640776641 
Producttransglycosylase-associated protein 
Protein accessionYP_001313573 
Protein GI150376977 
COG category[S] Function unknown 
COG ID[COG2261] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0212169 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTATAA TCTGGACCAT CATCATCGGC TTTATCGCGG GTATCGTGGC CAAGCTCATC 
GTGCCCGGCG AAAACGAGCC AAAGGGCTTC ATTCTAACGA CGATCCTGGG AATCGTAGGG
GCCTTTGTCG CCTCCTATCT GGGGCAGGCA TTGGGGTGGT ACAACGCCAA CGAGGGTGCC
GGCTTCATCG GAGCTATTGT AGGAGCTGTG ATCGTCTTGC TCGTATGGGG CGCCGTCGCC
CGGCGTGCCT AG
 
Protein sequence
MGIIWTIIIG FIAGIVAKLI VPGENEPKGF ILTTILGIVG AFVASYLGQA LGWYNANEGA 
GFIGAIVGAV IVLLVWGAVA RRA