Gene Smed_4842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4842 
Symbol 
ID5318448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1349901 
End bp1350260 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content54% 
IMG OID640776629 
Producthypothetical protein 
Protein accessionYP_001313561 
Protein GI150376965 
COG category[S] Function unknown 
COG ID[COG5478] Predicted small integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0133702 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCAAA TTCTTTTTCG AATGGCTGAT TTCCTTTCTC GGCCGCCAGG CTTCTATTTC 
ATGATCGTGG CGATGATTGT CAGCACCGCC TTGGTGCCTT TCGGTCTGAC AAACGTGATC
ACATATGCTC TGTCAGTCGC TGCAATAGTG ATCACCAGCG TCGTTTTAAT CCAAGGCTAT
CGAGACACGG CGGCAATTCA CGCCAAGCTC GATGAAATCA TCGTCTCGAT GCGTGAAACT
CGGAACGAGG TGGTCGGCCT AGAGCACGAA CAACCAGAGC GCATCGCCGC GGCAGTCGAG
CGTCTCGAAG CGGAAGCTGC GGGTCAAGCC AGAGCTGGAA TATCGCACCT CGACCGATGA
 
Protein sequence
MNQILFRMAD FLSRPPGFYF MIVAMIVSTA LVPFGLTNVI TYALSVAAIV ITSVVLIQGY 
RDTAAIHAKL DEIIVSMRET RNEVVGLEHE QPERIAAAVE RLEAEAAGQA RAGISHLDR