| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4835 |
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| Symbol | |
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| ID | 5318441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1347147 |
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| End bp | 1347974 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640776623 |
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| Product | ATP dependent DNA ligase |
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| Protein accession | YP_001313555 |
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| Protein GI | 150376959 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | [TIGR02779] DNA polymerase LigD, ligase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0490207 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCAGAG CATCCTCGAA GAAGCCCCGC GACGTTGCCC CGAATGATCC CATGCCGGCG
CGCATCGATC CCTGCCTTGC CACTCTCGTG GACAAGCCCC CCATCGGCCC CGACTGGGCC
TATGAGGTAA AGTGGGACGT GTGTGGATAC CGGCTGGCAG TGCACATCGA GCCTGGCCGG
GTGCGGGTTC TCACGCGCGG CGGCTACGAT TGGACCGATC GCTTTCCGTC GATCGCCGAT
GACGCGCGGC GCCTTGCCGT CAAGACAGCC ATTCTCGACG GGGAGGCGGT TGTTCTGAAC
GATCAGGGCC GCTCGGATTT CGGCATGCTG CAACGGGCTC TCGGGCGCTT GTCGTCAGCA
GTCGAAGCCG GTGCGATCGT CTTCTATGCC TTTGACGTTC TTTACCTCGA TGGCCGCGAC
GTGCGCCGTT TGCCGCTGCG CGAGCGTCGG CGGCTGCTTG AGCCGCTCGT CGCAGGCCGG
GAAGGGGCCG TTCGCCTGTC GGAAGAAGTT CAGGCTGATG GCGACGCGTT CTTCAGCGTC
GCGTGCGCAC ATGGGCTCGA AGGCATTATC GCCAAGCACG TCGAGAAGCC TTATAGCTCC
GGCCGCGGCG AGTGGTGGCA GAAGATCACT TGCAAACGCC GGGATAGCTT TGTTATCGTA
GGCTTTGAGC CGTCCACCGT GCCTGGCCAC CTGGGCCGGC TTCTGCTCGC CGCTCGCAAG
AATGACGACC TGGTCTACCT CGGGGCTGCG GCACGGGCTG GTCGCACGAT CTATCACGCG
AGCTGCGCAA CGTCCTCGCA TCGGTCGTTG CGAAAAAACC GGCAGTGA
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| Protein sequence | MVRASSKKPR DVAPNDPMPA RIDPCLATLV DKPPIGPDWA YEVKWDVCGY RLAVHIEPGR
VRVLTRGGYD WTDRFPSIAD DARRLAVKTA ILDGEAVVLN DQGRSDFGML QRALGRLSSA
VEAGAIVFYA FDVLYLDGRD VRRLPLRERR RLLEPLVAGR EGAVRLSEEV QADGDAFFSV
ACAHGLEGII AKHVEKPYSS GRGEWWQKIT CKRRDSFVIV GFEPSTVPGH LGRLLLAARK
NDDLVYLGAA ARAGRTIYHA SCATSSHRSL RKNRQ
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