Gene Smed_4817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4817 
Symbol 
ID5318632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1337205 
End bp1337843 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content59% 
IMG OID640776611 
Producthypothetical protein 
Protein accessionYP_001313543 
Protein GI150376947 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.542662 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCTGC TACGCGGCAC GGCAATCCTC ACATCCAAGG GCGAGACGGT GATCGAAGAT 
CTCCGCATGG GCGATCTTGT TAAGACGGTC CGCGGCGAAT TACTGCCGGT CATATGGATG
GGTCGCCACG TCTATCGGCG TACGTCACCC ACGTGGAACG ATAGCGTGGT GCCGATCCGC
ATCCGCCGTT TCGCCCTCGA CAAACAAACG CCGCGCAAAG ACCTCTACCT CTCGTCCGGT
CACGCGCTCT ATGTCGACGG CGTCTTTATC AGACCAAAGG ATCTCATCAA CGGAACGTCT
GTTGCACCGG CGCTGCCTGG CAAGTTGGAT GTGCTCGAAT TCTACCACAT CGTGCTCGCC
ACACATGAAG CGGTATTGGC CGAGGGTGCC CCTGTCGAGA CTTTCCTCGT GGAAGGCTCC
AATTATGAGG AGTTCACGAA CGGCGCGGAA TACGCGCGAC TTTATCCCGC TGGCGAGCAC
TCCTCGATGA AGCCGTTCGC CAAAACGGTC GGCTATGGCG GCAGGGAGCA TCTGAATGCG
CTTATGCGAC TTGCAACGCG TCAGCTCGTC CGGCCACGTT CACCCCTTGA GGACGTCTAT
ATACGCGTAG TGACACGCTC CGCCGAGCTG GCTCTTTGA
 
Protein sequence
MCLLRGTAIL TSKGETVIED LRMGDLVKTV RGELLPVIWM GRHVYRRTSP TWNDSVVPIR 
IRRFALDKQT PRKDLYLSSG HALYVDGVFI RPKDLINGTS VAPALPGKLD VLEFYHIVLA
THEAVLAEGA PVETFLVEGS NYEEFTNGAE YARLYPAGEH SSMKPFAKTV GYGGREHLNA
LMRLATRQLV RPRSPLEDVY IRVVTRSAEL AL