| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4810 |
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| Symbol | |
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| ID | 5318697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 1329561 |
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| End bp | 1331069 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640776604 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001313536 |
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| Protein GI | 150376940 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.800331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATCGC ATCCCAGGCC TGAGGAAGGT CATAGCTACG GTCAAATCCT CAAGTCGACG
GCGCTGATCG GCGGTTCGTC GGCCGTCAAC GTGGTATTTG CGATCTTCCG CAACAAGGCG
ACGGCTTTGC TGCTCGGTCC CGCGGGCGTA GGGCTGATGG GTCTCTACAG CTCCATCGCC
GATATCGCCT GCGCACTCGC CGGGCTTGGA ATCCAGGCGA GCGGCGTACG CCAGATCGCC
ATAGCCGTCG GCAGCGGCGA CGCGGACGCG ATCGCGCGGA CGGCCACTGC GTTGAGGCGC
GTATCGGTCC TGCTGGGGCT TGTTGGCGCC CTTCTCCTAA CTGCTCTGGC AGTGCCAATC
GCATGTTTCA CTTTCGGCGG TCATGGCTAT GCCGGATGCG TCACTCTACT CTCGGCCGCG
ATCTTCCTCC GCCTGCTGGC GGACGGACAG ACTGCCTTGA TCCAGGGCAT GCGAGATATC
GCCAGCCTTG CCCGCATCAA TGTCCTCGCC GCCTTCTTCA GCACGGTTGT CACAATCCCG
CTGATCTATT TTTTTGGCGC GTCGGGCATC GTGCCCTCGC TCGTGGTCGT TGCTGCGGCT
TCGCTCGCGA CCTCCTGGTG GTACGGCCGG CGACTGCGGG TAACCGCGCG CCCGATGTCG
ACAGCACAAC TCCGCCGAGA GGTGGAAGCC CTCTTGAAGC TCGGCTCCGC CTTCATGGTC
AGCAGCTTTC TAACATTGGG CGCAGCCTAT GCGGTGCGCA TCTTCGTGCT GCGCGCCGAA
GGCTTGACGG CGGCCGGCCT CTACCAGGCA GCCTGGACAC TCGGCGGTCT CTATGCCGGC
TTCATCCTGC AGGCGATGGG AACCGATTTC TACCCGCGCC TGACGGCGGT GGCGGAAGAC
AATGGCGAAT GCAACCGCCT CGTCAACGAG CAAGCCCAGG TCAGCATGCT ACTCGCCGGC
CCTGGCCTCA TAGCAACGCT CACCGCCGCG CCATTGGTGG TCAGGCTGCT GTATTCGCCC
GAATTCTACC CCGCTGTGGA ACTCCTTCGC TGGATCTGCA TGGGCATGAT GCTGCGGATC
ATTTCATGGC CAATGGGGTT CATCGTTCTC GCAAAAGGTG CCAGGAGAGC CTTTTTCTGG
ACGGAGGTTA CGGCAACCGT GGTCCATGTC GGCCTCGCAT GGCTCTGTGT GGGCGTGTTT
GGATCGGCCG GCGCAGGCCT GGCGTTTGTC GGTCTATATG TCTGGCACGG CTTGCTAATC
TATGCGATCG CACGTCACCT CTCGGACTTC CGCTGGTCCG CCACCAACCG AAAGCTAGCC
CTGTTCTTCC TGCCTGCGTC AGGCTTCGTC TTCGGTGCTT TCGTCGCTCT GCCGCCTTGG
CCGGCGACGA TATTCGGCAT GCTGACAACC GCGCTGAGCG GAGCCTATTC ACTGCGGATG
CTCATGGAAC TCGTCCGGCT GCCGTCCTTG CCGGCCGCAG TCCGCGCCTG GTGCTCCCGG
TCGACCTGA
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| Protein sequence | MQSHPRPEEG HSYGQILKST ALIGGSSAVN VVFAIFRNKA TALLLGPAGV GLMGLYSSIA
DIACALAGLG IQASGVRQIA IAVGSGDADA IARTATALRR VSVLLGLVGA LLLTALAVPI
ACFTFGGHGY AGCVTLLSAA IFLRLLADGQ TALIQGMRDI ASLARINVLA AFFSTVVTIP
LIYFFGASGI VPSLVVVAAA SLATSWWYGR RLRVTARPMS TAQLRREVEA LLKLGSAFMV
SSFLTLGAAY AVRIFVLRAE GLTAAGLYQA AWTLGGLYAG FILQAMGTDF YPRLTAVAED
NGECNRLVNE QAQVSMLLAG PGLIATLTAA PLVVRLLYSP EFYPAVELLR WICMGMMLRI
ISWPMGFIVL AKGARRAFFW TEVTATVVHV GLAWLCVGVF GSAGAGLAFV GLYVWHGLLI
YAIARHLSDF RWSATNRKLA LFFLPASGFV FGAFVALPPW PATIFGMLTT ALSGAYSLRM
LMELVRLPSL PAAVRAWCSR ST
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