| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4807 |
|---|
| Symbol | |
|---|
| ID | 5318694 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | + |
|---|
| Start bp | 1326635 |
|---|
| End bp | 1327336 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640776601 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001313533 |
|---|
| Protein GI | 150376937 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.281149 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACTG AGCGCCTGCC AAAGTCGCGG GTCGTGCCGG CGGTTCATGG TAGCCGCCGG
GCTAGCGGCG ATCCTGGTTA CATGGTGGAA CTGGCAGGGG TGCTCGGACA AGCCTATGGC
CTGGGAGGTC TGATCGAGCT CTACGGACGC TTCATGACGG GGGATGGCCT CGTCGATGCG
CTGATGCGTC ACGTGATCTG GCGAAGCGTG GTGAGGCGGT GCGGCAGCGG TCTGCAGGTT
GGCAGCGGCG CCGAATTCAA GCATCCTGAA ACCTTCGAGA TCGGCAACGG CGTGTTCATT
GGTGCACAGG CTTATATCCA GGGTCGTCAT GACGGCAGAT GCGTGATCGG CGACAATGTC
TGGATCGGCC CGCAAGCCTA TCTCGACGCC CGGGATCTGA TCCTTGAAGA TTATGTCGGA
TGGGGACCTG GGGCGAAGGT CCTTGGTTCG AGCCACACCG GGACACCTGT CGATGTGCCG
ATCATCCTCA CCGATCTTGA AATCAAGCCG GTTCGCGTCT GCGCATGGGC CGACATTGGC
ACGAATGCGA CCATCCTCCC CGGCGTAACG ATCGGGAAGG GCGCCCTTGT TGGGGCGGGC
GCAGTCGTCG TCCGCGACGT CGAACCCTTT GCTGTCGTAG CGGGGGTACC AGCGAAATTC
CTGCACTGGC GAGCGGATGC TGCGGTGCCT ACGAAATCAT GA
|
|---|
| Protein sequence | MSTERLPKSR VVPAVHGSRR ASGDPGYMVE LAGVLGQAYG LGGLIELYGR FMTGDGLVDA
LMRHVIWRSV VRRCGSGLQV GSGAEFKHPE TFEIGNGVFI GAQAYIQGRH DGRCVIGDNV
WIGPQAYLDA RDLILEDYVG WGPGAKVLGS SHTGTPVDVP IILTDLEIKP VRVCAWADIG
TNATILPGVT IGKGALVGAG AVVVRDVEPF AVVAGVPAKF LHWRADAAVP TKS
|
|---|
| |