Gene Smed_4787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4787 
Symbol 
ID5318409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1305197 
End bp1305964 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content57% 
IMG OID640776583 
Productchromosome partitioning ATPase 
Protein accessionYP_001313515 
Protein GI150376919 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0489] ATPases involved in chromosome partitioning 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCATG CGGAAACGAC CTTGCACGAG TTTCCCGAAG CGGAACGGCT GAGCCGAATC 
GGAGCGGAAC CGGTTTGGAA GATGCTTTCG CCATGTCGAG CCGATCCGCG TTCCGTTGCG
GGCAGCTGGT TTGTCACGAC GGGCCGATCA AATCCGAAAC ACGCCGCGTT CGACATGCTG
CGTACCAAGC TGCTGCTAGC GTTGCAGCAA AAGAACTGGA AGACGGTTGC TATCACGTCG
CCGACTCCCG GATGTGGAAA GACCTTTGTT GCATTGAACT TGGCGTTCAG CCTGGCCAAC
CAGAAGGATT GCCGCACGGT GCTGGTCGAC CTCGACCTGA AGCGGCCGCA GATTGCCAAG
ACGCTCGGCA TCGAGGCCCC GTCGACCATA GAAAAGTATC TGAAAGGCGA GAGTGAAATC
GGTGATGTGT TCCAGCGTTA CAGCGACAAT CTGGCGATTG GCGCCAGCAA GCAGGCCGTG
CCGTTTTCGG CGGAGTTGCT GCAAACCCGC GGAGCGGTAA AGCAGCTGCA AGAGATGCAG
CAGAAGATGA ACCCGGACGT CGTCCTCTTT GACATGCCGC CGATGCTGTC CAACGACGAT
GTGGTGGGAT TTCTGCCAAA CGTCGATTGC GTCATACTCA TCGCCGCTTC GGAGCAAAGC
ACCTTGGCTG AAGTCGACAT TTGCGAACAG GAGCTGTCGG AAAGGACCAA CGTACTTGGT
GTGGTTTTGA ACAAATGCCG ATTTGCACCT GAGAAATACG GCTACTGA
 
Protein sequence
MEHAETTLHE FPEAERLSRI GAEPVWKMLS PCRADPRSVA GSWFVTTGRS NPKHAAFDML 
RTKLLLALQQ KNWKTVAITS PTPGCGKTFV ALNLAFSLAN QKDCRTVLVD LDLKRPQIAK
TLGIEAPSTI EKYLKGESEI GDVFQRYSDN LAIGASKQAV PFSAELLQTR GAVKQLQEMQ
QKMNPDVVLF DMPPMLSNDD VVGFLPNVDC VILIAASEQS TLAEVDICEQ ELSERTNVLG
VVLNKCRFAP EKYGY