Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4780 |
Symbol | |
ID | 5318402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 1298335 |
End bp | 1298721 |
Gene Length | 387 bp |
Protein Length | 128 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640776578 |
Product | transposase IS3/IS911 family protein |
Protein accession | YP_001313510 |
Protein GI | 150376914 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.248666 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTGCGC CTATAGCTAG CCCTAGAACG ATCCATATGA TTGAAGCTGT GCCGGAACGC CTTGAGGGTT CACCTCGTCA GTTGCGGCGT TTTTGGTCGG ACGAGTTCAA GGCCTTTGCG GTCGAGGAGG CGTCCAGGCC GGGAGCGAAC ATTTCGGCGG TTGCTCGACA GATCGGTATT CTGCCTTCGC AGCTCTTTCG ATGGCGACGG GAGCTTAGTG GAGATGGTGA GCAAAGCTCT GCTCTGGCGA AAGAACAACA GCCGAGATCT GCGGCAATTA GGGAACGCGT TGTGGAGGTC GTCATTGGCG ATGCCGTCGT ACGTGCCGGT GCGGACGTCG AGGAGGCGCA CTTGCAGCGG GTGATCCGAG CGGTGCGGTC GGCATGA
|
Protein sequence | MSAPIASPRT IHMIEAVPER LEGSPRQLRR FWSDEFKAFA VEEASRPGAN ISAVARQIGI LPSQLFRWRR ELSGDGEQSS ALAKEQQPRS AAIRERVVEV VIGDAVVRAG ADVEEAHLQR VIRAVRSA
|
| |