Gene Smed_4780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4780 
Symbol 
ID5318402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1298335 
End bp1298721 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content59% 
IMG OID640776578 
Producttransposase IS3/IS911 family protein 
Protein accessionYP_001313510 
Protein GI150376914 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.248666 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCGC CTATAGCTAG CCCTAGAACG ATCCATATGA TTGAAGCTGT GCCGGAACGC 
CTTGAGGGTT CACCTCGTCA GTTGCGGCGT TTTTGGTCGG ACGAGTTCAA GGCCTTTGCG
GTCGAGGAGG CGTCCAGGCC GGGAGCGAAC ATTTCGGCGG TTGCTCGACA GATCGGTATT
CTGCCTTCGC AGCTCTTTCG ATGGCGACGG GAGCTTAGTG GAGATGGTGA GCAAAGCTCT
GCTCTGGCGA AAGAACAACA GCCGAGATCT GCGGCAATTA GGGAACGCGT TGTGGAGGTC
GTCATTGGCG ATGCCGTCGT ACGTGCCGGT GCGGACGTCG AGGAGGCGCA CTTGCAGCGG
GTGATCCGAG CGGTGCGGTC GGCATGA
 
Protein sequence
MSAPIASPRT IHMIEAVPER LEGSPRQLRR FWSDEFKAFA VEEASRPGAN ISAVARQIGI 
LPSQLFRWRR ELSGDGEQSS ALAKEQQPRS AAIRERVVEV VIGDAVVRAG ADVEEAHLQR
VIRAVRSA