Gene Smed_4754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4754 
Symbol 
ID5319153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1275198 
End bp1275638 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content58% 
IMG OID640776552 
Producthypothetical protein 
Protein accessionYP_001313484 
Protein GI150376888 
COG category[S] Function unknown 
COG ID[COG2323] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.204724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0118925 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCCG TCGCTCGCGG TATCACGATC TATTTCATAC TCCTTGTCGC GCTCCGGCTC 
TCCGGCCGGC GCACGGTCGC GCAGATGACC ACTTTCGATT TCGTTCTGCT GCTCATCATC
GCGGAGACGA CCCAGCAGGC ATTGCTGGGT GACGATTTCT CAATCGTCAA TGCAGCGCTG
CTCATCCTGA CGCTGTTCGG TGTCGATATC GTTCTCTCCT ACCTCAAGCA GTGGTCGCCG
AAGATCGCCT TGGTGCTTGA TGGCACCCCT ACCGTGCTCA TCGCCAACGG CAACGTCGAC
GACCGCGCGC TGAAGAGAGC GCGGATCAAT ATCGACGACA TTCTCGTTGC CGCCAGAGAA
CAGCAGGGTC TCGCACGCCT CGACCAGATC AAATTCGCCG TTCTCGAAGC GGATGGGGGA
ATAAGCATCA TTCCCAGGTG A
 
Protein sequence
MESVARGITI YFILLVALRL SGRRTVAQMT TFDFVLLLII AETTQQALLG DDFSIVNAAL 
LILTLFGVDI VLSYLKQWSP KIALVLDGTP TVLIANGNVD DRALKRARIN IDDILVAARE
QQGLARLDQI KFAVLEADGG ISIIPR