Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4730 |
Symbol | |
ID | 5319076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 1250559 |
End bp | 1251248 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640776528 |
Product | hypothetical protein |
Protein accession | YP_001313460 |
Protein GI | 150376864 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.18458 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00433602 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGGGTA TCCTTATCAG GAGTGCGATC GCCGTAAGCC TGGGGGTAGC GTCCACCCCG GTCTTATCGC AGACGGAGCA GCCGGCGCAG GGCCAGTCGA GCGGCCAATC CACCGACTGC CCGGCCGGCA CGGAATGTCC GCAAGGCGGC ACGCAGCCGG ACCAGCAGCC TGACCCCCAG GGGGGTGCAA CACAGCAGGG GCAGACCGGC CAGGACCAGC AGCAACAGCC AGCTGATCAG CAACAGGATC AGCAAGGCCA ATCCGATACA AAGCAGGATC AGGGCGGCAC GCAAACGCAA GAGCAGGGGT CGGACGCGCA GACCCAGCAG CAAGATTCGG AACAGCAGCC TTCGCAAGGC GGAACCGATC AACCGGCTCA AGGAGAGTCC CGTTCGACCG AGCAGGGTCA GACTTCCGGC TCTTCCGGAA ACGTGGACGT GACGATAGAG CAGAAGACGG AAATCACGCA GGTCATCAAG GAAGAGAACG TCGACCCGAT CGACGTCGAC TTCGATGTGT CCGTCGGCGT GGCAGTACCG GAGACTGTCA AGGTCGAGCT GCAACCGGTT CCGACCCGAA TCGTACAGAT CGTACCCGAA TACGAGGGGT ACCTGTTCTT CGTACTGGCA GACGGCAGGA TCGTCATTGT CGAACCGTCG TCTCTAGAAA TCGTGGTGAT CCTTTCCTAG
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Protein sequence | MKGILIRSAI AVSLGVASTP VLSQTEQPAQ GQSSGQSTDC PAGTECPQGG TQPDQQPDPQ GGATQQGQTG QDQQQQPADQ QQDQQGQSDT KQDQGGTQTQ EQGSDAQTQQ QDSEQQPSQG GTDQPAQGES RSTEQGQTSG SSGNVDVTIE QKTEITQVIK EENVDPIDVD FDVSVGVAVP ETVKVELQPV PTRIVQIVPE YEGYLFFVLA DGRIVIVEPS SLEIVVILS
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