Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4719 |
Symbol | |
ID | 5318899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 1242136 |
End bp | 1243308 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640776517 |
Product | polysaccharide pyruvyl transferase |
Protein accession | YP_001313449 |
Protein GI | 150376853 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0055407 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCGTATCT TGCTTACGGG TATCCCGTCC TATCTGCAGC GAACCGTCTC GGGCGTAAAC GGCGCCGAGG TCCGCCACAG GCCCTATTTC GATGAGGTCA GAACCAAGAA GGAACTGATC GATCAGGTCA AGAAGATCGC CAATACCGGC AACTACCTGA TCGGCGAGGG CGCGGCCCAT GCCCTGCGCG GGCACGACGT CACCTATTTG CCTTTCTGGC ACCTCGTCAA TAGCCGGAAC TCCGATGAGG TTTATGAGCG CCTTAATGAG GAATTCGACA TCTGCGTGTT CGCTTCGGCC AACCTTCTGC GTCCCGGCTA TTCGGCCGAT CTGGAAGCAG AGGTATTTCA GAAGCTGAAC ATGCCGGTGG TGATCATGGG GATCGGCATT CAGCGGAGGG AAGGGCTCAA GGAAAACCTG CCTCCCGGCA CGCTCAAGTT CCTTGAGGTT CTGAAGAAAA AGGAGAGCTT CTTCCTCACG CGCGGCTACT TCACCGCCGA GTTCCTGCGG GAGCAGGGTA TGAAGTTCGT CAAGCCGACG GGCTGCCCTT CGCTCTTCTT TGCGCCGGTC GAGATGAAGC GTTCGCTCAC CGCGCTGGCC AATCCGGAGC TCGCCTCGTC GCAGAAGATC GCCTTCGGAG GCTATCTCGG AAGCGTTGCC GACACGATCG TCGACGCCCA CGCACTACTG AAGCCGGAAA GCGTTGCGAG CTATGTCATC CAGGACGAGG TGGTCGCCTA CAATCTTTCC CTTCCCGTGG ACGACGACCT GCCTGTTTAC GACCGCGCGA GCGGGCGCAT TACTGGCGAT ACCGCTTACA AGCATTCGGA AAAGTGGCAG CGTAAGCACG AGCTGTTGGT GTTCTTCGAT ACCAATCAGT GGCGAAGCTG GGTCTCCACG CGGGATCTCT GCTTCGGCCG CCGCTTTCAC GGCTGCATCA TCGGCATGCA GGCGGGCGTT CCTTCGCTCA TGATCGCGGT CGACGACCGC ATGCGGGAAA TGCTGGAGTT TATCGGATTC CCCTACATGG AAGCGGCGAT CTGGAACCGG GAGGCGGACA GGAAGGCCTA TCTTTCGAGC TTTCTGTCCA AAATCGACTC GCAGGCGGTC ATCGACCGGT ATTCGGCGTG CGAGACCAAC TTCCGAAATG CTCTGGCTCA TGTCGGGCTC TAG
|
Protein sequence | MRILLTGIPS YLQRTVSGVN GAEVRHRPYF DEVRTKKELI DQVKKIANTG NYLIGEGAAH ALRGHDVTYL PFWHLVNSRN SDEVYERLNE EFDICVFASA NLLRPGYSAD LEAEVFQKLN MPVVIMGIGI QRREGLKENL PPGTLKFLEV LKKKESFFLT RGYFTAEFLR EQGMKFVKPT GCPSLFFAPV EMKRSLTALA NPELASSQKI AFGGYLGSVA DTIVDAHALL KPESVASYVI QDEVVAYNLS LPVDDDLPVY DRASGRITGD TAYKHSEKWQ RKHELLVFFD TNQWRSWVST RDLCFGRRFH GCIIGMQAGV PSLMIAVDDR MREMLEFIGF PYMEAAIWNR EADRKAYLSS FLSKIDSQAV IDRYSACETN FRNALAHVGL
|
| |