Gene Smed_4719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4719 
Symbol 
ID5318899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1242136 
End bp1243308 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content59% 
IMG OID640776517 
Productpolysaccharide pyruvyl transferase 
Protein accessionYP_001313449 
Protein GI150376853 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0055407 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTATCT TGCTTACGGG TATCCCGTCC TATCTGCAGC GAACCGTCTC GGGCGTAAAC 
GGCGCCGAGG TCCGCCACAG GCCCTATTTC GATGAGGTCA GAACCAAGAA GGAACTGATC
GATCAGGTCA AGAAGATCGC CAATACCGGC AACTACCTGA TCGGCGAGGG CGCGGCCCAT
GCCCTGCGCG GGCACGACGT CACCTATTTG CCTTTCTGGC ACCTCGTCAA TAGCCGGAAC
TCCGATGAGG TTTATGAGCG CCTTAATGAG GAATTCGACA TCTGCGTGTT CGCTTCGGCC
AACCTTCTGC GTCCCGGCTA TTCGGCCGAT CTGGAAGCAG AGGTATTTCA GAAGCTGAAC
ATGCCGGTGG TGATCATGGG GATCGGCATT CAGCGGAGGG AAGGGCTCAA GGAAAACCTG
CCTCCCGGCA CGCTCAAGTT CCTTGAGGTT CTGAAGAAAA AGGAGAGCTT CTTCCTCACG
CGCGGCTACT TCACCGCCGA GTTCCTGCGG GAGCAGGGTA TGAAGTTCGT CAAGCCGACG
GGCTGCCCTT CGCTCTTCTT TGCGCCGGTC GAGATGAAGC GTTCGCTCAC CGCGCTGGCC
AATCCGGAGC TCGCCTCGTC GCAGAAGATC GCCTTCGGAG GCTATCTCGG AAGCGTTGCC
GACACGATCG TCGACGCCCA CGCACTACTG AAGCCGGAAA GCGTTGCGAG CTATGTCATC
CAGGACGAGG TGGTCGCCTA CAATCTTTCC CTTCCCGTGG ACGACGACCT GCCTGTTTAC
GACCGCGCGA GCGGGCGCAT TACTGGCGAT ACCGCTTACA AGCATTCGGA AAAGTGGCAG
CGTAAGCACG AGCTGTTGGT GTTCTTCGAT ACCAATCAGT GGCGAAGCTG GGTCTCCACG
CGGGATCTCT GCTTCGGCCG CCGCTTTCAC GGCTGCATCA TCGGCATGCA GGCGGGCGTT
CCTTCGCTCA TGATCGCGGT CGACGACCGC ATGCGGGAAA TGCTGGAGTT TATCGGATTC
CCCTACATGG AAGCGGCGAT CTGGAACCGG GAGGCGGACA GGAAGGCCTA TCTTTCGAGC
TTTCTGTCCA AAATCGACTC GCAGGCGGTC ATCGACCGGT ATTCGGCGTG CGAGACCAAC
TTCCGAAATG CTCTGGCTCA TGTCGGGCTC TAG
 
Protein sequence
MRILLTGIPS YLQRTVSGVN GAEVRHRPYF DEVRTKKELI DQVKKIANTG NYLIGEGAAH 
ALRGHDVTYL PFWHLVNSRN SDEVYERLNE EFDICVFASA NLLRPGYSAD LEAEVFQKLN
MPVVIMGIGI QRREGLKENL PPGTLKFLEV LKKKESFFLT RGYFTAEFLR EQGMKFVKPT
GCPSLFFAPV EMKRSLTALA NPELASSQKI AFGGYLGSVA DTIVDAHALL KPESVASYVI
QDEVVAYNLS LPVDDDLPVY DRASGRITGD TAYKHSEKWQ RKHELLVFFD TNQWRSWVST
RDLCFGRRFH GCIIGMQAGV PSLMIAVDDR MREMLEFIGF PYMEAAIWNR EADRKAYLSS
FLSKIDSQAV IDRYSACETN FRNALAHVGL