| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4717 |
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| Symbol | |
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| ID | 5318897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1238200 |
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| End bp | 1240881 |
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| Gene Length | 2682 bp |
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| Protein Length | 893 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640776515 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001313447 |
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| Protein GI | 150376851 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.337059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0164521 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGGCA ATAGGGAAGA TACCGACCTC ATAGTGGTGG CGATGCCGCT CTACGGCCAT
GCAGCCCTCG TTCTGGAGGC GATCGAATCC GTTCTCGCCT CGAAGCTCTC CGGATGCAGT
GTAGCGGTCG TCGTATCGGT CGATGGGGAT CCGCGACAGG AGACCTTCGA TCAGCTGCTT
CTCTACGCGG CGGCCCATCC GGCGGTCCAT GTTCTCTTCG GCGCCAATGC CGGGCCGGGC
GGGGCGCGCA ACCGTGCGAT CGAATACGTT CTCGCGAACC TGCCGGAAGC CGAAGCAGTC
TATTTCCTCG ATGCCGACAA TCGCGTGCTG CCCGGGACCA TCGAGACCCT ATACAGGCAA
CTGCGCACAA GCGGTTGCGG GTGGATTTAC ACCAATATCG ACACTTTCTC GGTGAGCTGG
CGCGCCCATT ACGGCAATCG CTACTCGCGG CTCCTGCACT GCATAACGGA CAATATCTGC
GACACCGGCT CCATGATCTC GCTCGATGTG TTTCGGGCGG GGGTTCGTTT CGACGCCGAC
AGGCAGAACG GTTTCGAGGA CTGGGAATTC TGGCTGTCCT GCATCGAGCA CGGCTTCGTC
GGAGAACCAT GCCACGACAC GACCTTCGAA TACCGGCTAA GGGCGGAGAG CCGGTTCAAG
GAGGCGAACC GCGATCGCGC TGCCTCCGTG AGCTTCCTCC GAAAGCGCCA CAGGGCGCTG
TTCCAGCGCC CCATGCTCGT CGATTTCGAG CATGAGGAAT GCCCGCGTTA TCTCTTTGCG
CGGACGGAAG ACGCCGCCAT TTCTTACTTT ACCGACCCGA CAAAGGCACC TAAGCGGCTT
CGCCTCGACG ATATCATTCC GGCGTTCTGG GCGAGCGTCG GTGAGCCGGA CAACGTGCAT
TTCCCGCCCT TCCTGATCGC CGGAAGCGGC GCCACGCTCG ACCTGCTGCT GCGCTCCCGG
ATGCTGCCAA ACGTGCTCTC CCACCTGGAG CGCCTGAGCG AGAAGGCCAA TGTGGTATTC
GTCCAGCTCG GCAACGATGC GGCTCAGCGC AAGATCGAAC CGGTCTTCCT TGAGGCCGGC
GCCCAGCATA ACGCTTCGCC GGACCTCATT TTTCTGTCCA CATCGCTCGT GCGCGACGTC
ATCCAGAACA AGGCGCTGGA CTGGTTCGCG TCCATCGGCA ATCAGCAGGT CTGGCCGACA
TCGGCTATCT TGAAAGTGCG TTTTCCCTTC CCGAGAAGCC TGCCGCGCCG TTTGCTCATC
ACACCCCAGC AGGTGATGAT CAACTGCGTC AACGCCATCG CGACCAGCCC GCTGCGGCGA
ACGGCCGGCA AACGCTGGAC CTGGCGCCCG GCACGGCTCG TTCCCTATTC CGATCTTCAC
AAAGCCCTTC GCCAGGAGGT CGGAGGCTCG CCCATATTGC CGCTCGGCCA TAGCGAGGGG
GGCAGAAAAA CGGCGGCCCT GCTCGTGCCC AATGCATCCT TCGGTGGCGC CGAGAAGGTC
GTATACGCTG CTTCGCGCGA GCTGAAGGCT GCGGGCTACG AGACACATCT TTTCGTGCTC
GGCACATCCA GAATGGATGT GATCGACGAG TTCGACCAGA GCTTCGATTA TATTCACTTC
TGGGACCAGG GTATCCCCGC CTGGGGCGGC TCCGGCTCGT TCCTGGGGCA CGATTTCATT
GCCGAAGGCC ATGACGTCGA TTGGGCCGCG CTCAAGGGTC AGCTTTCAGG CTTCGACCTC
GTGATCAACA ATCACGTCAT GGCGGTGCAT CCGCTTATCG CGCGCCTGCG CTCGGAAGGA
ACCCGAACAG CCTGCTACCT TCATGTGGTC GACAATACCG CCTTCAAAAG ACCCGCCGGC
CAGCCTTTTG CGGCGATCGC CCACGAGCAT TGCTATGATG CGTTCCTGAC CTGCTCGGAA
CAGCTCAAGC TTTATCTTCA CAGTTTCGGC GTGCCGCATG AAAAGATCTT TGCCGTACCC
AACGGCGCGA GCTTCTCCGT GCCGCCCAAG GTCCTGTCTG AAGTGCTTTC GGTCAGACGG
ATCGAACGGA AGGACGATCG GCTTCGGGTG CTCTATATGG GTCGCCTCGA CCAGCAAAAG
GGGATCGATC GTCTGGCTGC GGCCATCGCC GAGCTGCGCG CGTCGCGCGT GCCTTTCGAT
GCCCGGGCGG TTGGCGGTGA GATTCTTGCG GATGCCACGA TATCCTGGAC GGATCGCCTG
AGGGACTTGG GCGTCGAAGT GCGCTCACCG GTCTTCGCCA GCAAGGATCT GATCAAGGCG
CTCGGTTGGG CGGATGTCCT TCTGATGCCG TCCCGCTGGG AGGGGGCTCC CTTGATGATT
GCCGAGGCAC AGCAGCTCGG CTGCGTACCG ATCGCGACGG CGGTTGGTGC CGTCGACGAG
CTCATCACCG ACGGCGAGGA CGGCATTCTG ATCGAGGCCG CGGCCGATCC GCAGGTGGTG
CGGGATATGG CAAAGGCCAT CGAGGAAGTG GCCCTCAATC GTAAGCAGCT GGCGCCCCTC
ATGGAAGGCT GCCTCAGAAC AGCGGCACGC CGTTCATGGG GATCGTCCTT CTCCGAGTTC
CTCGGCTGGT GCGATCGCTC TGTGCATAAT TCATCGCTTT CGCGCGCAAC GGTCATACGT
GGCCGCGAGG CATCCAATCC CGGAGTAGCG GCTGTGGGCT GA
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| Protein sequence | MSGNREDTDL IVVAMPLYGH AALVLEAIES VLASKLSGCS VAVVVSVDGD PRQETFDQLL
LYAAAHPAVH VLFGANAGPG GARNRAIEYV LANLPEAEAV YFLDADNRVL PGTIETLYRQ
LRTSGCGWIY TNIDTFSVSW RAHYGNRYSR LLHCITDNIC DTGSMISLDV FRAGVRFDAD
RQNGFEDWEF WLSCIEHGFV GEPCHDTTFE YRLRAESRFK EANRDRAASV SFLRKRHRAL
FQRPMLVDFE HEECPRYLFA RTEDAAISYF TDPTKAPKRL RLDDIIPAFW ASVGEPDNVH
FPPFLIAGSG ATLDLLLRSR MLPNVLSHLE RLSEKANVVF VQLGNDAAQR KIEPVFLEAG
AQHNASPDLI FLSTSLVRDV IQNKALDWFA SIGNQQVWPT SAILKVRFPF PRSLPRRLLI
TPQQVMINCV NAIATSPLRR TAGKRWTWRP ARLVPYSDLH KALRQEVGGS PILPLGHSEG
GRKTAALLVP NASFGGAEKV VYAASRELKA AGYETHLFVL GTSRMDVIDE FDQSFDYIHF
WDQGIPAWGG SGSFLGHDFI AEGHDVDWAA LKGQLSGFDL VINNHVMAVH PLIARLRSEG
TRTACYLHVV DNTAFKRPAG QPFAAIAHEH CYDAFLTCSE QLKLYLHSFG VPHEKIFAVP
NGASFSVPPK VLSEVLSVRR IERKDDRLRV LYMGRLDQQK GIDRLAAAIA ELRASRVPFD
ARAVGGEILA DATISWTDRL RDLGVEVRSP VFASKDLIKA LGWADVLLMP SRWEGAPLMI
AEAQQLGCVP IATAVGAVDE LITDGEDGIL IEAAADPQVV RDMAKAIEEV ALNRKQLAPL
MEGCLRTAAR RSWGSSFSEF LGWCDRSVHN SSLSRATVIR GREASNPGVA AVG
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