Gene Smed_4657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4657 
Symbol 
ID5318820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1167591 
End bp1168406 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content61% 
IMG OID640776455 
ProductN-formylglutamate amidohydrolase 
Protein accessionYP_001313387 
Protein GI150376791 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3741] N-formylglutamate amidohydrolase 
TIGRFAM ID[TIGR02017] N-formylglutamate amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.173304 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0289491 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTCT TCGAAGTCCG GCGAGGCAAT TCGCCCGTCA TCCTCGGCTT TCCGCATACG 
GGGACGGACC TACCCTCGTC GATCTGGGAA CGGCTCAACG ACAATGGCCG CATTCTCGCA
GACACCGACT GGCACATCCA CGAACTCTAC GAAGGTCTGC TCCCGGGTGC GACGACTGTC
CGCGCGACCT TTCACCGCTA TGTCATAGAC GCCAATCGCG ACCCTGATGG CGTCAGCCTC
TATCCCGGCC AGAACACGAC GGGGCTCGTG CCCGAAAGCG ACTTCGACGG TCAGCCCATC
TGGAAAGAAG GCCAAGGACC GGCGGAGGCC GACATCGCAG AGCGCCTGCG CGATTTTCAC
GCGCCCTACC ATGCGGCGCT TGCAGCGGAG ATTGCCCGTG TCAGGGCGAT CCACGGCATT
GCCGTGCTCT ATGATTGCCA TTCGATCCGC TCACATATTC CCTTCCTTTT TGAAGGCACG
CTGCCGGACT TCAACATCGG CACCGACAGG GGCAAAACCT GCGCTTTGGA AATCGAGCGA
TCGGTCGAGG AAATCGCCTC TGAAACAGAA GGTTACAGCC ATACTCTAAA TGGTCGCTTC
AAGGGCGGCT GGACGACCCG CCATTATGGC CGCCCGGAAC AGGGTGTGCA CGCGATCCAG
ATGGAACTGG CGCAATCGAC GCATCTGGCG ACGGAAGCGC CGCCCTTCGC CCTGGATGCG
GCGAAAGCCG AAAGGCTCCG CCGGCCTCTG GCGGCAATTC TGGAACGCAT CGGGAAAATA
GCAAACGAAC TCAAAAGGAC AGGGAGCGAG GCATGA
 
Protein sequence
MAVFEVRRGN SPVILGFPHT GTDLPSSIWE RLNDNGRILA DTDWHIHELY EGLLPGATTV 
RATFHRYVID ANRDPDGVSL YPGQNTTGLV PESDFDGQPI WKEGQGPAEA DIAERLRDFH
APYHAALAAE IARVRAIHGI AVLYDCHSIR SHIPFLFEGT LPDFNIGTDR GKTCALEIER
SVEEIASETE GYSHTLNGRF KGGWTTRHYG RPEQGVHAIQ MELAQSTHLA TEAPPFALDA
AKAERLRRPL AAILERIGKI ANELKRTGSE A