| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4623 |
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| Symbol | |
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| ID | 5318934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 1125670 |
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| End bp | 1126617 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640776422 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001313354 |
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| Protein GI | 150376758 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.570776 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTATC TCGATAATGT GCGTGTGTTC GTGCGCGTCG TGGAGCTCGG AACGCTGTCG
GCAGCGGGCC GTGATCAACG TGTTACGCCG GCGGTTGCCA GCAACAGAAT CAAAGAGTTG
GAGCGGCATA TGGGGGTGCG CCTGTTCAAC CGCACCACCC GAAAACTGAC GCCGACCGAG
CACGGACGAG TCTTCTACGA AGGCGCGGTG AAGATCCTCG AAGCGGTCAA CGAGGCGGAA
AGCGCCATTG CCGATCTTTC AAGAAATCCG AAGGGAGCGC TGAAGATCAC CGCTCCGCTC
GGTATCGGCC GCCGCCTGAT CGCGCCCGGA ATCCCGGAGT TCCATGACCG CTATCCGGAT
ATCGAAGTCA GGCTGCGCCT CTCCGATCAT AATGTCGACA TTCTCGCCGA AGGCGTCGAC
ATCGCCTTCA AGCTCGGCAT ACTCGAGGAT TCCAACCTGC GCATGCGCGG CATCATGAAC
TGCGACCGCG TGCTCTGTGG CTCGCCGCGC TACTTCGAAA GGCGCGGCAC GCCCTCGTCG
CCGGACGACC TCCTCAGCCA AAGCCACGAC TGTCTTCTGC TGCGCTATCC CGGGTCGAAG
GAATATTACT GGACCTTGCA GACGCCGGAT GGCGTCCGCA AGTTCGAAGT CGCCGGGCCC
TATGATTCGG ATGACGGAGA CGTGCTTACC CAATGGGCGC TCGACGGCCG CGGCATCGTC
AACAAGCCGC TATTCGAGGT GAAGCACTAT ATCGACGAGG GCCTGCTCGT GCCGATACTC
GAGGAGACGC CGCCGCTCGG CGCGCAGCTT GCGGCGATCT ATCCGCACAA ACGCTTCCAG
GATCCGAAAG TCCGTCTGAT GATCGACTTC ATGGCCGAGC GCTGTCAGCG GCTGATAGGC
AAGATGCTGG CTGAGCCTGC TGAAGTACCG GAGCGTTCCA GCGCTTGA
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| Protein sequence | MSYLDNVRVF VRVVELGTLS AAGRDQRVTP AVASNRIKEL ERHMGVRLFN RTTRKLTPTE
HGRVFYEGAV KILEAVNEAE SAIADLSRNP KGALKITAPL GIGRRLIAPG IPEFHDRYPD
IEVRLRLSDH NVDILAEGVD IAFKLGILED SNLRMRGIMN CDRVLCGSPR YFERRGTPSS
PDDLLSQSHD CLLLRYPGSK EYYWTLQTPD GVRKFEVAGP YDSDDGDVLT QWALDGRGIV
NKPLFEVKHY IDEGLLVPIL EETPPLGAQL AAIYPHKRFQ DPKVRLMIDF MAERCQRLIG
KMLAEPAEVP ERSSA
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