Gene Smed_4613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4613 
Symbol 
ID5318380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1114422 
End bp1115123 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content63% 
IMG OID640776413 
Productphosphoribosyltransferase 
Protein accessionYP_001313345 
Protein GI150376749 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0503] Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.490651 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAAA CGAACAGAAT GGAGCCGCAC GAGTTCTGGC AGGAACTCTT TCCACCCGCG 
ACCTTTTCCG GACATGGCCG CTTCAGGACC TCTTTCCCGG CCAATCTTGC CGACGGGCGC
CAGATACTCC TGCCGATCCG GCCGCTTTCC GACGGCAAAC ACGCCTTGGC CTCGCTGATC
GTCAATCAGG CGAGTTTCGA AGTGCAGGAT GCGCTCGCCG AGGAACTGGC GGCTCGGCTT
TCCGCTTTCG AGCCGGAAAT CGTCGCAGGA CTTCCGACGC TCGGATTGAC GCTTGCCGCA
GCCGTTGCCC GCAAGCTCGG TCACAAGCGT TATGTACCTC TCGGAACGTC GCGAAAATTC
TGGTACGTCG AAGACCTTTC GGTGCCGCTG TCGTCGATCA CAACGCCGGG CCAGAAAAAG
CGGCTCTATG CGGACCCGCG CATGCTGCCG CTCTTGAGAA ACCGCAGGGT CGTCCTGATC
GATGACGTGA TATCGAGCGG TGCCTCTATC GTCGCTGGCC TGTCACTCAT GGCGTCGTGC
GGGGTCGAGC CGGTCGCCAT AGGTGCCGCC ATGCTGCAAT CGGAGCGGTG GCGCCAGCCG
CTCTTCGACC TGTCCGCGCA ATGGCCCGCC CGGACTGTCG GCGTCTTCGC AACGCCGATG
CTCGTCCGGG CGGAAGATGG CACATGGACG GCGGCGGAAT GA
 
Protein sequence
MTETNRMEPH EFWQELFPPA TFSGHGRFRT SFPANLADGR QILLPIRPLS DGKHALASLI 
VNQASFEVQD ALAEELAARL SAFEPEIVAG LPTLGLTLAA AVARKLGHKR YVPLGTSRKF
WYVEDLSVPL SSITTPGQKK RLYADPRMLP LLRNRRVVLI DDVISSGASI VAGLSLMASC
GVEPVAIGAA MLQSERWRQP LFDLSAQWPA RTVGVFATPM LVRAEDGTWT AAE