| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4584 |
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| Symbol | |
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| ID | 5319000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1078743 |
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| End bp | 1080836 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640776385 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001313317 |
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| Protein GI | 150376721 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.99351 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTACAG GTGTGGGGCG TGTCGTAGCA GGCTTTTTTC TCCTGCTGAT CTTTGCTTGT
GCGACGCCCA CGATGGCTCA AGAGCCGGCG ACGACGCCAC CGGGCAAGGT TCAGCAACTC
ATGCAGTTGC TGGACGACCC CGAGGTTCGT GGATGGATCG AGACGAAAAA GACCGCTCCG
GAGCAAGCCG TCAAGCCATC CCAAGGTTTC GCTGCAAACT GGATCGCCGC CATCAGGGGG
CACCTTTCCG GTCTTGTGGC CGCGGCGCCG CGGGTGATGC CCGAATGGCG GGCGGCGCGG
GAACGCGTGT CGGGCGACAT GCAGCGCCAG GGAAGCTTGC CGGTCATCTG GGCGTTTGCG
GTGGTCCTCC TGATCGGTTA CGGCGCCGAG TTCCTTCTTC GCTATCTCCT GCGGCGTAGC
GCCAACCGCA ACAATGCGCA AGGGAGCGGA GGGTTCGCGG CTTTCGTTCG CATTGCACCC
CTTGTCGCTT TCGCAGTCGC TGCCGTCGCC GCTTTTGTGT TCGCCGATTG GCCGCGTAGC
CTTGAGGCGG CGGTCGCGCC GCTCCTGATC GCCTGGATCG TCGCCCGCCT GCTGATTGCC
ATCGCTTCGG CCGTGTTGTC GCCCGCGATC GGAGGTGCCA CGGCCGCGGA CGCAGCAAGG
CCGCATGTGT CGCTTGCTCC GCACGTCGCC CGTTATTGGC TCAGAAGATC CGTACTGTTC
ATCTGCACCA TCGCGATCCT ATGGGCTATC CTCGATATGA TGCGGGCGCT TGCCTTCCCC
GCAGACGTCC GCGAACTCAC CTCCGCGGTC CTGGGGCTTA TTGTTCTTGG ACTGGCTGTC
GATACGGCAT GGCGGCGACC GGTTTCCGAA ATGGCCCCCG CGCGCAGCGT TCTGCGCAAC
GCCTCGATCG TCGGTTTCCT GATCTTGCTC TGGTTTTTCT GGATCGCGGG CATGGAGGTG
TTGTTCTGGC TTGGCGTCTA TGTCCTCGGG CTGCCGCCAT TGCTGCGCTT CGTCAGCGCC
GCGACACGGA CAATGTTGGA TGCTGCCGCC GCGGAGGACT TCCGTGTGCT GCGCAATGTT
TTGATTGAAC GGGGGGCGAG GCTCGTCATC ATAGCTCTCG CCGCCGTGTG GCTAGCCATG
ACCTTCCGCA TAAGCGGCGC GCAGATGATG CAGGACGACG CCTTCAATCG CATTTTCCGC
GGCGTGCTGG CGGGTATAGT GATACTGCTT GCGGCCGATC TCATTTGGCA GTTGGCCAAG
GAATCCATCA ACGTGCGCAT CGCGCGCGCC AGCCTGACGG TGGAGGATCC GGGCGAGCTC
GCGCGCAACA CGCGCCTGCG CACGCTGCTG CCGATTTTGC GCAATTTCCT CGCGGCCTTC
ATCGCAGTCG TTGCCGGCAT GATGGTGCTG TCGGGTCTCG GCGTCGAGGT CGGTCCACTG
ATCGCCGGCG CTGGCGTTTT CGGGGTTGCC ATCGGCTTCG GTTCCCAAAC GCTCGTCAAG
GACGTGATCA GCGGCATCTT CTACATGATG GACGATGCCT TTCGTGTAGG CGAATATATC
CAGAGCGGCA GCTACAAAGG GACGGTGGAA TCCTTCAGTA TCCGTTCGGT CAAATTGCGG
CATCACCGGG GGCCGGTGTT TACCGTGCCC TTTGGCTCGC TCGGCGCGGT GCAGAACATG
AGTCGCGACT GGGTCATCGA CAAGTTCCTG ATCAATGTTT CCTACGATGC GGACGTTGCC
AAGGTGAAGA AGGTGGTGAA AGGGGTCGGG GCCACATTGC TCGAGGACCC CGAGCTGGCG
CCGATGATCA TCGAAACAGT AAAGATGAAG GGTGTCGAGC AATTCGGCGA TTACGGCATA
TCCCTGAGCT TCGCGATGAA GACCAAGCCG GGACACCAGA CGCAAGTCCG CCGTCGTGCG
CAGGCGATGA TCAAGGACGC CTTCAAGAAC AATGGCATCC AGTTCGCCTC GCCGACTGTT
CAGGTCGCCG GCGACGACGC GCAATCCGGG TCTGCGGCGG CGGCCGCGAC GCGTGATGCG
ATCGCCAAAA AGAATGCGGC CCTGGCTCAG GGTGGGGAGG AAGCGGCGGA ATAG
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| Protein sequence | MGTGVGRVVA GFFLLLIFAC ATPTMAQEPA TTPPGKVQQL MQLLDDPEVR GWIETKKTAP
EQAVKPSQGF AANWIAAIRG HLSGLVAAAP RVMPEWRAAR ERVSGDMQRQ GSLPVIWAFA
VVLLIGYGAE FLLRYLLRRS ANRNNAQGSG GFAAFVRIAP LVAFAVAAVA AFVFADWPRS
LEAAVAPLLI AWIVARLLIA IASAVLSPAI GGATAADAAR PHVSLAPHVA RYWLRRSVLF
ICTIAILWAI LDMMRALAFP ADVRELTSAV LGLIVLGLAV DTAWRRPVSE MAPARSVLRN
ASIVGFLILL WFFWIAGMEV LFWLGVYVLG LPPLLRFVSA ATRTMLDAAA AEDFRVLRNV
LIERGARLVI IALAAVWLAM TFRISGAQMM QDDAFNRIFR GVLAGIVILL AADLIWQLAK
ESINVRIARA SLTVEDPGEL ARNTRLRTLL PILRNFLAAF IAVVAGMMVL SGLGVEVGPL
IAGAGVFGVA IGFGSQTLVK DVISGIFYMM DDAFRVGEYI QSGSYKGTVE SFSIRSVKLR
HHRGPVFTVP FGSLGAVQNM SRDWVIDKFL INVSYDADVA KVKKVVKGVG ATLLEDPELA
PMIIETVKMK GVEQFGDYGI SLSFAMKTKP GHQTQVRRRA QAMIKDAFKN NGIQFASPTV
QVAGDDAQSG SAAAAATRDA IAKKNAALAQ GGEEAAE
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