| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4577 |
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| Symbol | |
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| ID | 5318024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 1070114 |
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| End bp | 1071472 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640776378 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001313310 |
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| Protein GI | 150376714 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGTTCC GAAAAAAGCT TTTCAAGAAA ATCGGCGGCT TGCGACAAAT TCTCAGTCGA
GAGAGAACGC TGCTCGAGCG CCTGCAGAGC ATTGCGCATC TGCTCACCGG AAACATTCTG
AGCTCGGTGA TCGGCCTCAT CGGCTTTGCC CTCACGGCGA GGGCCCTCGG CCCGGCGGGC
TATGGCATTC TCGCGCTGTG TTTCTCCTAT ACGCGCGCGG TCGAGAGGAT CGTAAGCTTC
CAGTCCTGGC AACCGCTGAT CAAATACGGC GCGCACTCGC TCTCGGATAA CGCCGATGAC
TTCAAAGAAA TGCAGTCCTT GCTCAAATTC GGGCTGCTGC TCGATGTTTC TGCGGCGCTC
GCCGGATGGC TGATCGCCGT CCTGTTCATC CTGTTGGCCT CACCCTGGCT CGGGATCTCG
GAGGACGGAG CGAGCCTTGC CATACTCTAC TGCACGGTGC TGCCATTCCA GGTATCCGGC
ATGCCGACGG CCGTTTTGCG CCTTTACGGG CGCTTCATGG CGATCGCCTA CGGCCAGGTC
GCCACAAGCG TCCTTAGGGT GGCTCTTTGC GCCATCGGCG TCGCCACGGG CGCCGGCCTG
TTCGAATTCA CGCTCATCTG GATGTCGGCG CAGATCATCG GCACCCTCGT TCTCGTGCTT
TTCGCGCTGG CCGAACTGCG CCGGCAAGGT ATCCTCTCGG GCCTGCTGAG CGCCCCGCTT
CGCGGCATTA CCGCCCGGTT TCCGGGGCTT TGGAAGTTTG CGATCTCGGC GAACCTGTCG
CTCACCATCC GTTCGAGCGC CAACGAGCTC GACACGCTGC TCGTCGGCTA TCTCGCCGAT
CCGACTTCCG CCGGACTCTA TCACATCGCT AAACGCATCG GCCGCATCGC GCAGCAGGCC
GGGGTGCAGG TACAGGCCGT CCTTTATCCG GAACTTGCCC GGGCATGGGC CGCCAAGGCG
CTCGGCGCCT TTCATCGGGC AGTCGCACAG ATGCAGGCGC TTCTCCTCGC CTGCGGCCTC
TTTCTGATCG GCGGCCTCTA TCTCCTTATC GGCCCTCTCC TCTCCTGGGC CGCCGGCCCG
GAGTTCGCGG CCGCCGGCCC ACTCGTGATC GTGCAGTCGA TCGCCGTCAC GATGACCCTG
TGCGGCGCCG TCATCCGGTC GGCGCTTCTG GCAATGGGAC GTGAGAACGA GATATTGCGC
AGCGTCACGA TCGCCGCGAT CGGTTTTCAT GCGACTGCAT TCGCTCTCAT TCCGACCATG
GGCGCCATGG GAGCGAATGT CGCTCATATC GTCATGGCTT CGATCTGGTT GTCAACGATG
ATGCTGAGCT ACCGTCGCAC CCCGGCGCCA GGGCCTTGA
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| Protein sequence | MAFRKKLFKK IGGLRQILSR ERTLLERLQS IAHLLTGNIL SSVIGLIGFA LTARALGPAG
YGILALCFSY TRAVERIVSF QSWQPLIKYG AHSLSDNADD FKEMQSLLKF GLLLDVSAAL
AGWLIAVLFI LLASPWLGIS EDGASLAILY CTVLPFQVSG MPTAVLRLYG RFMAIAYGQV
ATSVLRVALC AIGVATGAGL FEFTLIWMSA QIIGTLVLVL FALAELRRQG ILSGLLSAPL
RGITARFPGL WKFAISANLS LTIRSSANEL DTLLVGYLAD PTSAGLYHIA KRIGRIAQQA
GVQVQAVLYP ELARAWAAKA LGAFHRAVAQ MQALLLACGL FLIGGLYLLI GPLLSWAAGP
EFAAAGPLVI VQSIAVTMTL CGAVIRSALL AMGRENEILR SVTIAAIGFH ATAFALIPTM
GAMGANVAHI VMASIWLSTM MLSYRRTPAP GP
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