Gene Smed_4571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4571 
Symbol 
ID5319239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1061415 
End bp1062353 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content59% 
IMG OID640776372 
Productputative enzyme 
Protein accessionYP_001313304 
Protein GI150376708 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGGCT TTCTGATGCC CTCGCAACCA GTTCGCATCG CTTATATTGC AGGTTACGGA 
CGCAGCGGCT CGACGATACT CGACATTGCC TTGGGGCAGC ATGCTTCCGT GATGGGGGCG
GGGGAGGTAA CGTCGCTGAC ACGCCACGTA TGGCGCCACA ACGAATATTG TGCTTGCGGC
AATGCCATTC GTGACTGCTC GTTCTGGAGC TCGGTTTTCC AGGATTGGTC CACCAGCGGT
GGTTCCGGAC TCATGGAAGA ATATAGCGGC CTTCAGGAAC GGTTCGAAGG CCTTTCCATG
CTCATGCGAC TGTTGAGCGG CATCGGCCTC GGCAAGCAAT TTTCGCTCTA CACCCTTCAT
ACGAAGCGCC TGCTCGAAGC GATGCACGCG CACTCTGGAC GGCAGACGAT CGTCGATTCC
TCGAAACTGC CGGGGAGAGC GATGGCGATG GCGCAGATCC CTGGAATCGA CATGCGGGTC
ATTCATCTGG TGCGCGACGG GCGCGGCGTC GCGTGGTCTT TGCTGAAGGG CTATGAGCGC
GACGCGAAAT CGGGGTTGCA GAAGGAAATC AGGCCGAAAT CCGTGTTCAG GACGGCCGTG
CGATGGAGCA TGGTCAATCT TGCGGTCGAA TATCTTTCGC GGAAATTAGG ACCCGAAAAG
GTCATGCGCG TCAGATACGA GGATTTTGCG TCTGACCCTG TTGCCGTCAT GCAGAAAATC
GGGACGTTTC TCGAACTTGA CCTTGGCCCG GTTGGGGCCT CCCTGCAGAA GGGCGAGGTC
ATGGCCACGG GACATCAGGT GGCAGGGAAC CGATTGCGCA TGAATGCGTC GATCGCACTC
AACAAGGACG AGGCCTGGCG GACGCGGATG CCGGCGCGGC AGCAGATTTC TTTTCAGCGG
CTGGGCGGCT GGATGCTCAG ACGCTACGGC TATCTCTGA
 
Protein sequence
MEGFLMPSQP VRIAYIAGYG RSGSTILDIA LGQHASVMGA GEVTSLTRHV WRHNEYCACG 
NAIRDCSFWS SVFQDWSTSG GSGLMEEYSG LQERFEGLSM LMRLLSGIGL GKQFSLYTLH
TKRLLEAMHA HSGRQTIVDS SKLPGRAMAM AQIPGIDMRV IHLVRDGRGV AWSLLKGYER
DAKSGLQKEI RPKSVFRTAV RWSMVNLAVE YLSRKLGPEK VMRVRYEDFA SDPVAVMQKI
GTFLELDLGP VGASLQKGEV MATGHQVAGN RLRMNASIAL NKDEAWRTRM PARQQISFQR
LGGWMLRRYG YL