| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4562 |
|---|
| Symbol | |
|---|
| ID | 5319230 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | + |
|---|
| Start bp | 1049841 |
|---|
| End bp | 1050581 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640776363 |
|---|
| Product | phosphotransferase domain-containing protein |
|---|
| Protein accession | YP_001313295 |
|---|
| Protein GI | 150376699 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1387] Histidinol phosphatase and related hydrolases of the PHP family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.165591 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGGC AGGAATCGAT ATGCACTAGC AGGCCCGTGT TCCACCGGTA CCGGGATCTC
AGCCGAGCGC GATTGAATGT GGAGCTGCAG GTCCACACGA GTTGGACCGA CGGGCAGGCG
ACTGCGCTCG AAATCCTGCA AACGGCCAAG GAACGCGGTC TCGCGGCGTT GGCGTTCACT
GAGCACGTGC GCGAAGACAC GACATGGTTT CCCCGGTTCA GGGAGGAAGT CCTTTCTGCC
GCGCGTGGTT TTGACGATAT CAGCGTCTAT GTCGGTTGCG AGACGAAAGC CATGGACGAG
GACGGCCGGC TGGATGTGTC GCAAGATGTC CTGGATCGGT GCGACATCGT TCTCGGCGTC
GTTCACAGGT TCCCGGATGG CCGCGGCGGA TATCTGGACT TCGAGCAGCT TTCTTATGAA
AAAACGGCGG ATCTCGAATT CCGCCTGTCG ATGGGCATGG TCAAAAACGC GCCCATCGAC
GTCCTGGCGC ATCCGGGCGG AATGAGCCTG AGACGGCACG GTCGTTTTCC GGAAGCCTGT
TTCCGCGACA TGATGACCGC GACCCTCGAA CGGCAGATCG CGATCGAGAT CAACTCCTCC
TACCTCGTCG ACATGCCGGC GTTCCTCGCG CTGTGCGAAG AAGTAAACCC GTTCGTTTCG
ATCGGTTCCG ATGCGCATCG GCTGAGCGAA TTGGGTCATT GCAGAGATCA GCTACTCGAA
CTGGGAGCAG GGCAGTCATG A
|
|---|
| Protein sequence | MNGQESICTS RPVFHRYRDL SRARLNVELQ VHTSWTDGQA TALEILQTAK ERGLAALAFT
EHVREDTTWF PRFREEVLSA ARGFDDISVY VGCETKAMDE DGRLDVSQDV LDRCDIVLGV
VHRFPDGRGG YLDFEQLSYE KTADLEFRLS MGMVKNAPID VLAHPGGMSL RRHGRFPEAC
FRDMMTATLE RQIAIEINSS YLVDMPAFLA LCEEVNPFVS IGSDAHRLSE LGHCRDQLLE
LGAGQS
|
|---|
| |