Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4549 |
Symbol | |
ID | 5319050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 1036316 |
End bp | 1037083 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640776350 |
Product | ABC transporter related |
Protein accession | YP_001313282 |
Protein GI | 150376686 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAATC TTCTTGAAAT ACGTGATCTT CACAAACGTT ACGGCGCGGT AGAGGTGCTG AAGGGCGTCG ACTGCTCGAT GCGCCAAGGC GAGGTGATCA GCATCATCGG CTCCAGTGGC TCGGGGAAGA CGACGATGCT TCGCTGTATC AACATGTTGG AGGAGTTTCA GGGCGGCACG ATCGCGATCG ATGGCCAGGA AATCGGTTAC GAAACCGCAG GAGACGCTCG CCGGCGCAAG CCGGAGCGGG AGATCGCCCG CCAGCGCGCC CTGACCGGCA TGGCTTTCCA GCAGTTCAAT CTGTTTCCGC ATATGACAGC CGCCGCCAAT GTCATGCTCG GGCTCGTCAA AGTGAAGAAG ATGAGCCGCG ACGAGGCGAG GGGACTTGCC GAAAAATGGC TCGACCGCGT CGGTCTGCTC TCGCGAAAGG ATCATTATCC CGGACAACTT TCAGGTGGAC AGCAGCAACG CGTGGCGATC GCCCGTGCCA TTGCGATGAA TCCGAAGCTG ATGCTCTTCG ACGAGGTGAC CTCGGCGCTC GATCCCGAGC TCGTCAACGA GGTGCTGCAG GTTATCAAGG GGCTCGCCGA TGATGGCATG AGCATGCTGA TCGTCACCCA TGAGATGCGC TTCGCCTACG AGGTTTCGTC CCGGGTGATC TTCATGAATC AGGGGCGCAT CGCCGAGGAG GGGGATCCGC GCGAAATGTT CCTGAAGCCG AGGACCGAAC GCCTCGCGGA GTTTCTGAAG ACGTCGACAT TCAACTGA
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Protein sequence | MTNLLEIRDL HKRYGAVEVL KGVDCSMRQG EVISIIGSSG SGKTTMLRCI NMLEEFQGGT IAIDGQEIGY ETAGDARRRK PEREIARQRA LTGMAFQQFN LFPHMTAAAN VMLGLVKVKK MSRDEARGLA EKWLDRVGLL SRKDHYPGQL SGGQQQRVAI ARAIAMNPKL MLFDEVTSAL DPELVNEVLQ VIKGLADDGM SMLIVTHEMR FAYEVSSRVI FMNQGRIAEE GDPREMFLKP RTERLAEFLK TSTFN
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