Gene Smed_4549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4549 
Symbol 
ID5319050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1036316 
End bp1037083 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content59% 
IMG OID640776350 
ProductABC transporter related 
Protein accessionYP_001313282 
Protein GI150376686 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAATC TTCTTGAAAT ACGTGATCTT CACAAACGTT ACGGCGCGGT AGAGGTGCTG 
AAGGGCGTCG ACTGCTCGAT GCGCCAAGGC GAGGTGATCA GCATCATCGG CTCCAGTGGC
TCGGGGAAGA CGACGATGCT TCGCTGTATC AACATGTTGG AGGAGTTTCA GGGCGGCACG
ATCGCGATCG ATGGCCAGGA AATCGGTTAC GAAACCGCAG GAGACGCTCG CCGGCGCAAG
CCGGAGCGGG AGATCGCCCG CCAGCGCGCC CTGACCGGCA TGGCTTTCCA GCAGTTCAAT
CTGTTTCCGC ATATGACAGC CGCCGCCAAT GTCATGCTCG GGCTCGTCAA AGTGAAGAAG
ATGAGCCGCG ACGAGGCGAG GGGACTTGCC GAAAAATGGC TCGACCGCGT CGGTCTGCTC
TCGCGAAAGG ATCATTATCC CGGACAACTT TCAGGTGGAC AGCAGCAACG CGTGGCGATC
GCCCGTGCCA TTGCGATGAA TCCGAAGCTG ATGCTCTTCG ACGAGGTGAC CTCGGCGCTC
GATCCCGAGC TCGTCAACGA GGTGCTGCAG GTTATCAAGG GGCTCGCCGA TGATGGCATG
AGCATGCTGA TCGTCACCCA TGAGATGCGC TTCGCCTACG AGGTTTCGTC CCGGGTGATC
TTCATGAATC AGGGGCGCAT CGCCGAGGAG GGGGATCCGC GCGAAATGTT CCTGAAGCCG
AGGACCGAAC GCCTCGCGGA GTTTCTGAAG ACGTCGACAT TCAACTGA
 
Protein sequence
MTNLLEIRDL HKRYGAVEVL KGVDCSMRQG EVISIIGSSG SGKTTMLRCI NMLEEFQGGT 
IAIDGQEIGY ETAGDARRRK PEREIARQRA LTGMAFQQFN LFPHMTAAAN VMLGLVKVKK
MSRDEARGLA EKWLDRVGLL SRKDHYPGQL SGGQQQRVAI ARAIAMNPKL MLFDEVTSAL
DPELVNEVLQ VIKGLADDGM SMLIVTHEMR FAYEVSSRVI FMNQGRIAEE GDPREMFLKP
RTERLAEFLK TSTFN