Gene Smed_4539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4539 
Symbol 
ID5317978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1026604 
End bp1027104 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content62% 
IMG OID640776340 
ProductRES domain-containing protein 
Protein accessionYP_001313272 
Protein GI150376676 
COG category[S] Function unknown 
COG ID[COG5654] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAGCGC TAACGCTCTG GCGTGCCTTC GTACCGCGCT GGGCGCATAT GCCGCTTTCC 
GGTGCAGGTG CCGCCCGTTT CGGTGGCCGC TGGAATCCGG TCGGGGTACC TGCTCTTTAT
GCCGCGCGTG AACTTTCGAC CGCCTGGGCG GAATACAATC AGGGTTTCGT GCAGCATCCC
GCGCTCATCG TTCAGCTTGA ATTGCGCGAT GCAGTTCTCG CAGACCTGAC GGATTTCAAG
GTTCTCGCGG ACCTGGACGT GGATGAGACG ATCCATAGCT GCGAATGGCG CGACATGTTG
GACAAAGGCG CGGTACCGCA AACGCACCAG TTGCGCACCG CGCTTCTGGC GCGTGATTAT
CACGGGGTGA TCTACCCCTC CTTTATGTCT CCCGGCGGCA CCTGCGTCGC GCTCTGGCGT
TGGAACGGTG CGAAAGAGCC GCGCTTGGAT GTCATTGATC CCGAGGGCCG GCTGCCGAAA
TCACCGGCCT CGTGGGTTTG A
 
Protein sequence
MEALTLWRAF VPRWAHMPLS GAGAARFGGR WNPVGVPALY AARELSTAWA EYNQGFVQHP 
ALIVQLELRD AVLADLTDFK VLADLDVDET IHSCEWRDML DKGAVPQTHQ LRTALLARDY
HGVIYPSFMS PGGTCVALWR WNGAKEPRLD VIDPEGRLPK SPASWV