Gene Smed_4490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4490 
Symbol 
ID5319182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp974910 
End bp975413 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content62% 
IMG OID640776291 
Producthypothetical protein 
Protein accessionYP_001313223 
Protein GI150376627 
COG category[S] Function unknown 
COG ID[COG3195] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03164] OHCU decarboxylase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.910632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.397544 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACTC GTGACGATTT CATCCGGCGC TTTGGTGGCA TCTTCGAGCA CTCGCCATGG 
GTGGCGGAGC GCGCTTACGA CCGTGCCGCT TCCGCCGGAT TGACCGCAGG CAATGTGCAT
TCGGCGCTCT GCAACGCCTT CCGCGAGGCT TCGCCCGCGG ACCGGCTTCG GGTGCTGCGC
GCTCATCCCG ATCTCGCAGG CAAGCTGGCG GTCGCCGGCG AACTCACGGC GGATTCAAAG
GCCGAGCAGG CGTCCGCCGG GCTCGACAGG CTCTCCCCCG AAGAACATGC ACGCTTCACA
GAACTGAATT CGGCCTATAT CAAGAAATTC GGCTTTCCCT TCATCATTGC GGTTAAGGGG
CTGGTGAAGG AAGACATCCT CGCCGCCTTC GAGCAGCGCA TTGACAATTC CGCGGAAGAG
GAATTTGAAG CGGCCTGTGC CGAAGTCGAG CGGATTGCCC GCCTGCGGCT GCGATCCATG
CTTCCGGGAG ACGACTATGC CTGA
 
Protein sequence
MLTRDDFIRR FGGIFEHSPW VAERAYDRAA SAGLTAGNVH SALCNAFREA SPADRLRVLR 
AHPDLAGKLA VAGELTADSK AEQASAGLDR LSPEEHARFT ELNSAYIKKF GFPFIIAVKG
LVKEDILAAF EQRIDNSAEE EFEAACAEVE RIARLRLRSM LPGDDYA