Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4490 |
Symbol | |
ID | 5319182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 974910 |
End bp | 975413 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640776291 |
Product | hypothetical protein |
Protein accession | YP_001313223 |
Protein GI | 150376627 |
COG category | [S] Function unknown |
COG ID | [COG3195] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03164] OHCU decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.910632 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.397544 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGACTC GTGACGATTT CATCCGGCGC TTTGGTGGCA TCTTCGAGCA CTCGCCATGG GTGGCGGAGC GCGCTTACGA CCGTGCCGCT TCCGCCGGAT TGACCGCAGG CAATGTGCAT TCGGCGCTCT GCAACGCCTT CCGCGAGGCT TCGCCCGCGG ACCGGCTTCG GGTGCTGCGC GCTCATCCCG ATCTCGCAGG CAAGCTGGCG GTCGCCGGCG AACTCACGGC GGATTCAAAG GCCGAGCAGG CGTCCGCCGG GCTCGACAGG CTCTCCCCCG AAGAACATGC ACGCTTCACA GAACTGAATT CGGCCTATAT CAAGAAATTC GGCTTTCCCT TCATCATTGC GGTTAAGGGG CTGGTGAAGG AAGACATCCT CGCCGCCTTC GAGCAGCGCA TTGACAATTC CGCGGAAGAG GAATTTGAAG CGGCCTGTGC CGAAGTCGAG CGGATTGCCC GCCTGCGGCT GCGATCCATG CTTCCGGGAG ACGACTATGC CTGA
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Protein sequence | MLTRDDFIRR FGGIFEHSPW VAERAYDRAA SAGLTAGNVH SALCNAFREA SPADRLRVLR AHPDLAGKLA VAGELTADSK AEQASAGLDR LSPEEHARFT ELNSAYIKKF GFPFIIAVKG LVKEDILAAF EQRIDNSAEE EFEAACAEVE RIARLRLRSM LPGDDYA
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