| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4484 |
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| Symbol | |
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| ID | 5318349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 968351 |
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| End bp | 969847 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640776285 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001313217 |
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| Protein GI | 150376621 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCCACAT TTAAAGAGCT CGGCCTCTCG CAGGAGATCC TGGCGACACT GACCGCCAAC
GGTTTCGAGA AGCCGACGCC CATCCAGACC CAGGCCATTC CGCTTGTCCT CCAAGGCCGC
GATCTCATCG GCCTCGCCCA GACGGGCACG GGCAAAACGG CCGCCTTTGG CCTGCCGATG
ATCGAAAAGC TTCAGGCCGA CGGCAAACGC CCCGATCCGC GCAACATCCG TGCCCTCATC
CTTGCGCCGA CCCGAGAGCT CGTCAACCAG ATCGCCACCA ATCTTAAACT CTTCGTGAAG
AAGACACCGA TTAAAGTCGG AGTCGTGGTA GGCGGCGTGT CGATCAACAA GCAGACCGAA
CAGCTGGCGC GCGGCGTCGA TATTCTCGTC GCAACGCCCG GCCGTCTGCT GGATCTCATC
TCCCGCAAGG CTGTGACCCT CACCCAGGGA CGCTACCTCG TCCTGGACGA GGCCGACCAG
ATGCTCGACC TCGGCTTTAT TCACGACCTG CGCAAGATCG CGAAGCTCGT TCCGAAGAAT
CGTCAGACGC TGCTCTTCTC CGCGACCATG CCGAAGCTGA TCGCCGAGCT TGCCGGCGAA
TATCTCACCG ATCCGGTCAA GGTCGAGGTC ACGCGGCCCG GCAAGGCGGC CGACAAGGTC
GAGCAATATG TCCACTTCGT TCCGGGCAAG GACCTGAAGA CGACAATCCT CAAACAGACG
CTGACCGCAA ATCCGGACGG ATTGTCGCTG GTCTTCAGCC GCACCAAGCA TGGCGCCGAA
AAGCTGATGA AGCATCTGGA CCAGGTCGGT TTCAAGGCCG CCTCGATCCA CGGCAACAAG
AGCCAGGGCC AGCGAGAGCG CGCTCTGAAA GCCTTCCGCG ATGGTGAAAT CCGTGTACTC
GTGGCGACCG ATGTCGCCGC ACGCGGCATT GACATTCCCG GCGTGACGCA TGTCTACAAC
TACGACCTGC CGGAGGTGGC CGACGCTTAT GTCCACCGTA TCGGCCGCAC GGCCCGAAAC
GGCCGCGACG GTATTGCGAT CGCCTTTTGC GCCCCGGACG AAATCCGGCT GCTGCGCGAT
ATTGAAAAGC TGATGGGCAT CGAGATTGCC GTCGCCAGCG GAGAAGTTCC GGCCGACCAG
GCCCGCCCGT CCAAGGGACG CGGCGGTCGC GGCAACGCCC AGTCCCGCGG CAATGGCGCA
GGACAGCGCC AGGGCGGACC TCGCCGGGAT CGGCCACAAC GCCAGTCGGC AGCCGGCGGC
TTCGCCGGCG ACGAACTGTT GCGCGACGAC CGTTCGCAAC AGCACGAGCG CCGCGATCAT
CGTGCTCCGG GCCAGGACGG TCGTCCGGAA GGCAACCGCA ACCACGAAGC CAAGAAGCAC
CATGGCCGTC CGGGCCCGAA GCGTGACGGC CGGCGCGGCA ATGAAGGCCA GCCCAGCAAC
CGCAATGAAG GCGCCCGGGG CATGCGCCGC GCGGAAAATC GCGCGCCGCG AGGGTAA
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| Protein sequence | MSTFKELGLS QEILATLTAN GFEKPTPIQT QAIPLVLQGR DLIGLAQTGT GKTAAFGLPM
IEKLQADGKR PDPRNIRALI LAPTRELVNQ IATNLKLFVK KTPIKVGVVV GGVSINKQTE
QLARGVDILV ATPGRLLDLI SRKAVTLTQG RYLVLDEADQ MLDLGFIHDL RKIAKLVPKN
RQTLLFSATM PKLIAELAGE YLTDPVKVEV TRPGKAADKV EQYVHFVPGK DLKTTILKQT
LTANPDGLSL VFSRTKHGAE KLMKHLDQVG FKAASIHGNK SQGQRERALK AFRDGEIRVL
VATDVAARGI DIPGVTHVYN YDLPEVADAY VHRIGRTARN GRDGIAIAFC APDEIRLLRD
IEKLMGIEIA VASGEVPADQ ARPSKGRGGR GNAQSRGNGA GQRQGGPRRD RPQRQSAAGG
FAGDELLRDD RSQQHERRDH RAPGQDGRPE GNRNHEAKKH HGRPGPKRDG RRGNEGQPSN
RNEGARGMRR AENRAPRG
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