| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4468 |
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| Symbol | |
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| ID | 5318170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 949400 |
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| End bp | 950611 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640776269 |
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| Product | putative transcriptional regulator protein |
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| Protein accession | YP_001313201 |
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| Protein GI | 150376605 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0284418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCTGA CCAAGTCCAG CACCGAACTC GTGCGTCAGC AGAACAGCGC GCTGGTGCTC
GCGGCGCTTC GGCGGAAGGG CTCGCTTTCC CACACGGAGA TTGCGGCACA GACCGGGCTT
GCCTCGGCCA CGATCTCCGT TATCACGGCC GAGCTGGAGC GCGCCGGGAT CATCGCCAAA
ATCGAGAGGC ATGTGCAGGG CGGTCGCGGC CGGCCGCGGG TTCTCTTCGA GCCGAGACGC
GATTGCGGTC ACGTGATCGT CGTGCGGATC TCTTCCGACG TGGTGCAATA CTCGCTTGCT
GATTATGGCG GCATTCTGCT CGATCGTTTC GAGGAGGTGC GCGGTGACCT CGGCGGGACA
GCTGCCTTCG GGGAGGTCCT TGCAGCGGCA CTTGAACGGT TGCTCCTCCG CTCGAATATA
TCGAAGGACG AGGTGCTTGC CATCTCGATC AGCAGCAAGG GGCTCGTGGC CGCCGATGGC
GCGCGACTTA TCTGGTCCCC CGTCTTCGGC GGCGAGCAAC TCGATTTCGT GAAGCTGCTG
CGTCCTGATT GGCGCGCCAG GATCATGCTC AGCAATGAGT CGCTCCTCGT GGCGCACGCG
CTTGCCGTAA AGGAAGAGGA AAAACAGGTC GGTTTCCGCG CGCTCGCCGC CGTGTCGCTC
GGACACAGCA TCGGCCTCGG CCTTGCCCGA AGTGGCAGCT CCGGTGAGCT CGATGTCTCG
GCTCCGAACT TCGGCCATAT GCTGCATCAG GATGCCGCCG GGCTCTGCCG CTGCGGCAGT
TTTGGCTGCG TCGAGGCCGC CGCCGGTTTC TACGGGATTC TGCGCACGGC CTTCGAGGTG
CCCTCCAATA CCATCCCAGC CAAGTTCGTG CCGCTTTCGG AGATGGACAA GATCGCCGCG
CGTGCACGGC AAGGACATCG GATGGCCGCC TATGCCTTCC GACAGGCCGG CGTTGCGCTC
GGCAACGGAA TTTCCCGGAT GCTCAGTCTC TACGAGCCGA TGCCGATCTT CGTGACTGGA
CCGGGCACGC GCTATTTCGA TCTCCTGCAG AAGGGACTGG AGGAGGGCAT GGCACATTCG
CTGCAGGTGC GCCTTGAGGG CATGCCGCAG ATATCGGTGG TTATTGACGA ACAACGGCTC
GTTCTGGATG GTCATCTCGA CCGGGCGCTA GGGGCAATCG ACGGCGACAT TGCCGCCTCG
GGCCACCCAT GA
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| Protein sequence | MMLTKSSTEL VRQQNSALVL AALRRKGSLS HTEIAAQTGL ASATISVITA ELERAGIIAK
IERHVQGGRG RPRVLFEPRR DCGHVIVVRI SSDVVQYSLA DYGGILLDRF EEVRGDLGGT
AAFGEVLAAA LERLLLRSNI SKDEVLAISI SSKGLVAADG ARLIWSPVFG GEQLDFVKLL
RPDWRARIML SNESLLVAHA LAVKEEEKQV GFRALAAVSL GHSIGLGLAR SGSSGELDVS
APNFGHMLHQ DAAGLCRCGS FGCVEAAAGF YGILRTAFEV PSNTIPAKFV PLSEMDKIAA
RARQGHRMAA YAFRQAGVAL GNGISRMLSL YEPMPIFVTG PGTRYFDLLQ KGLEEGMAHS
LQVRLEGMPQ ISVVIDEQRL VLDGHLDRAL GAIDGDIAAS GHP
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