Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4448 |
Symbol | |
ID | 5318600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 932533 |
End bp | 933114 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640776250 |
Product | XRE family transcriptional regulator |
Protein accession | YP_001313183 |
Protein GI | 150376587 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0311191 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCTCTG ATACGCTGTC TAACGAGCTC CAGCGCTACG CAATCGGCCC TCGTATTAAG GCCCTGCGCC TGAGAAAGAA GCTGGGACTG GTGCAGTTGG CTGGCCATAC AGGGCTCTCG CCTGCGATGC TCTCGAAGAT CGAGCGCGGG CAGATGTTTC CAACACTGCC CACGCTGCTT CGGATCGCCA TGGTTTTCGG CGTCGGCCTC GATCATTTCT TCAATGTGGA TAAGGAGGAG CCGCTCATCG CGATTGTCCG GAAGGAGCAG CGTCTCAAAC TTCCTAGCCC GCCAGGCGAG AAGCACCCAG CCTTTCTATT CGAAAGCCTG GACTATCCCG CTTCTGACCG CCGCATGGAT GCGTTCTACG CCGAATTCCC GGTCGATTCG CCGCCCTCAG AGCCGCATCA ACATGGCAGC GCTGAGTTCA TCTACGTGCT CAGCGGTCGG CTTATAGTCA ATGTTAATGG CAAGGAGTGC GCGCTGGATA CGGGGGACGC TGTGTATTTC GACTCGAGCG TTCCGCACAG TTACCGCCAT GAAGGCAAAG AAATCTCAAC CGCGATTGTT GTGACTTCAT AG
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Protein sequence | MLSDTLSNEL QRYAIGPRIK ALRLRKKLGL VQLAGHTGLS PAMLSKIERG QMFPTLPTLL RIAMVFGVGL DHFFNVDKEE PLIAIVRKEQ RLKLPSPPGE KHPAFLFESL DYPASDRRMD AFYAEFPVDS PPSEPHQHGS AEFIYVLSGR LIVNVNGKEC ALDTGDAVYF DSSVPHSYRH EGKEISTAIV VTS
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