Gene Smed_4427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4427 
Symbol 
ID5318140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp919014 
End bp919835 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content64% 
IMG OID640776230 
Productmethyltransferase type 11 
Protein accessionYP_001313163 
Protein GI150376567 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.799504 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCCA GCTTCAACGT GCATGATGCG GCCGGATACG AACAGTTGAT GGGGCGCTGG 
AGCCGTAAGC TCGCGCCGAA ATTCATCGAC TTTGCAGGCA TTGGCGATGG CGAGAGGGTT
CTGGATGTCG GGTGTGGGAC CGGCAGCCTC ACCTTCGCGC TCGCCAAGGC AGCCAATCTC
CGAGAAATCG CCGCGATCGA CTATTCGCCC GTCTTTGTGG CGGAGGCAGC CCGGCGCAAC
ACCGATCCGC GCATAAAGTT CGAGGAGGCT GATGCCTGCG CTTTGCCCTT CGACGATGGA
AGTTTCGACC GTGCTTTCGC CCTGCTCGTC CTTCACTTCG TGCCCGAATC CGGCAAAGCT
GTCGCCGAAA TGCGCCGTGT CGTGCGGAGC GGCGGAGTTG TCGCGGCGGC GGTCTGGGAC
CATCTCGGCG GAATGCCCGG CATGCGCATG ATGGTCGATA CGGTGGCGGC ACTCAGTGAG
GGCGGGCGGC AGTTGCGCGC CCGCTATTGC TTTCAGCCGA TGGTGCAACC GGAAGAGATG
AAACGGGCTT TTGCTGCGCA GGGGCTCATG GACGTTGCGG AAACCCAACT GATGATCCGC
ATGGACTATC GGAACTTCGA TGATTACTGG GCGCCAATTG CCGCCGGCGA AGGGCCGCTC
GGCAAGTATG TGGCGGTGCT CGACGCAGAG GAGCGATCGC GCACGGAAGC CGCCGTACGC
GACGCCTATG AGGCCGGCGG CCCCGACGGC CCCCGCTCCT TTGCGAACGT AGCCTGGGCG
TGCCGCGGTA CAGTTCCGCC CACCAAGGTC GATCCGACCT GA
 
Protein sequence
MTSSFNVHDA AGYEQLMGRW SRKLAPKFID FAGIGDGERV LDVGCGTGSL TFALAKAANL 
REIAAIDYSP VFVAEAARRN TDPRIKFEEA DACALPFDDG SFDRAFALLV LHFVPESGKA
VAEMRRVVRS GGVVAAAVWD HLGGMPGMRM MVDTVAALSE GGRQLRARYC FQPMVQPEEM
KRAFAAQGLM DVAETQLMIR MDYRNFDDYW APIAAGEGPL GKYVAVLDAE ERSRTEAAVR
DAYEAGGPDG PRSFANVAWA CRGTVPPTKV DPT