Gene Smed_4422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4422 
Symbol 
ID5318986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp914413 
End bp915852 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content63% 
IMG OID640776225 
ProductFAD linked oxidase domain-containing protein 
Protein accessionYP_001313158 
Protein GI150376562 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.344156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.908517 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGACA TGAGCCTCAC CAATCTGCAA AACGGAATAA CAATGGTCAG CGCCGCGGCG 
ATCGAGGCTT TTGCCGGGCG GCTGCGAGGA CGCGTGCTGA TGGCGACCGA TGCCGCCTAT
GACGAGGCAC GCACGGTCTG GAATGGCATG ATCGATCGCA GGCCCGGCCT GATCGTGCAA
TGCGCCGGAG CCGCCGATGT CGTCAATGCG GTTCGTTTCG CGGCGGAGAA CCAGTTGCTA
CTCGCAGTGC GTGGTGGCGG CCACAACATC GCCGGCAACG CGGTTTGCGA CGGCGGTCTG
GTGATCGACC TCACGCCGAT GAAGTCGATC CGGGTTGACC AGACGACGAA GACGGCCTGG
GTTGAGCCTG GAGCAACGCT TGCCGAAGTC GACATGGAGA CGCAGGCCTT CCGCCTGGGT
CTGCCGACCG GCATCAATTC GACCACCGGT ATTGCCGGCC TGACGCTCGG CGGAGGCTTC
GGCTGGATCA CGCGCAAATT CGGACTGACG ATCGACAACC TGCTTTCGGC AGATGTGGTC
ACCGCGAATG GCGAACTGGT GCGCGCCAGC CCGACCGAGC ACCGGGACCT CTTCTGGGCT
ATCAGGGGCG GCGGCGGGAA CTTCGGGGTT GTGACCGCCT TCGAATTCCG CCTGCACGAA
CTCGGCCCGG AGGTGCTCTC CGGGCTCGTC GTCCATCCCT TTGCCGATGC CGAGAGCGTT
CTGCAGCAAT ACAGGCAGGC GCTCGAAAAT GCTCCGGACG AGCTCACCTG CTGGGTGGTG
ATGCGGCAGG CGCCGCCGCT GCCCTTCCTT CCGGCCGATT GGCACGGCAA GGAGGTTGTC
GTGCTCGCCA TGTGCCATTG CGGCGATCTC GAAGCAGGAG AGAAGGCAAT GGCGGGACTG
CGGGCGATCG GCAATCCCAT CGCAGACGTG GTATCGCCGC ATCCATTCGC CGGTTGGCAG
CAGGCCTTCG ATCCCCTGCT CGCGCCCGGC GCCCGCAATT ATTGGAAGAG CCACGACTTC
ATGGAGCTGT CCGACCAGGC GATCGGCGTC CTCACCGAAG CTATCAGAAA ATTGCCCGGT
CCCGAATGCG AGATATTCAT CGGCCATGTC GGCGGCGCCG CCGGCCGCGT CGCCGCCGAG
GAGACCGCTT TCCCGCAGCG CAGCTCGCAT TTCGTCATGA ACGTGCACGG CCGCTGGCGT
GATCCTGATC AGGATCAGGT CTGTATCGAC TGGGCACGCC ATCTTTTCGA AGCAGCCAAG
CCCTATGCCG CGGGCACCGC CTATGTCAAT TTCATGCCGG AGGACGAGAT AGACCGGGTC
GAGGCGGCCT ATGGCGCCAA TTATGGCCGG CTCGTAGAAA TCAAGCGGCG CTATGATCCG
CTCAATCTCT TCAGGATGAA CCAGAACGTG CGGCCGATCC AGGAACGCGG AGCGGCCTGA
 
Protein sequence
MNDMSLTNLQ NGITMVSAAA IEAFAGRLRG RVLMATDAAY DEARTVWNGM IDRRPGLIVQ 
CAGAADVVNA VRFAAENQLL LAVRGGGHNI AGNAVCDGGL VIDLTPMKSI RVDQTTKTAW
VEPGATLAEV DMETQAFRLG LPTGINSTTG IAGLTLGGGF GWITRKFGLT IDNLLSADVV
TANGELVRAS PTEHRDLFWA IRGGGGNFGV VTAFEFRLHE LGPEVLSGLV VHPFADAESV
LQQYRQALEN APDELTCWVV MRQAPPLPFL PADWHGKEVV VLAMCHCGDL EAGEKAMAGL
RAIGNPIADV VSPHPFAGWQ QAFDPLLAPG ARNYWKSHDF MELSDQAIGV LTEAIRKLPG
PECEIFIGHV GGAAGRVAAE ETAFPQRSSH FVMNVHGRWR DPDQDQVCID WARHLFEAAK
PYAAGTAYVN FMPEDEIDRV EAAYGANYGR LVEIKRRYDP LNLFRMNQNV RPIQERGAA