| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4395 |
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| Symbol | |
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| ID | 5319160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 890916 |
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| End bp | 892178 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640776199 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001313132 |
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| Protein GI | 150376536 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.87283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCATC TTTTGAAAAC ACTGGCAGGT ATGACCGTCA TTGCCGTCGT ATCCGCCTTT
CCCGCAAAGG CGGATACCGT TTCGATGTTT TGCTCGGCGA CCGACTACGA GCTTTGCGAG
AAGGCTGTCC AGAAATGGAC GAAAGAAACC GGCCATGACG TGAAACTCAA CCGGATGCCG
CAGAACCTCG ACGACGCCAT TCCGATCTAT CAGCAATTGT TCGCGGCCCA GTCGACCGAC
ATGGATGTCC TCTACATCGA CGTCATCTGG CTGGGTATGT TCAAGGATCA TCTCCTCGAC
CTGACGTCTC TCGTACCTGA GGAGGAGGTG AAGGCGCATT TCGCCTCTGC CGCGGATGCG
GCGCGCCTCG ACGGCAAGCT CCTGTCGATG CCTTTCTACA TCGACACCGG CCTGATGTTC
TATCGTAAGG ACCTGCTGGA GAAGTACGGC AAGCAGCCTC CGAAGACCTG GGACGAACTG
ACGGCGACCG CCAAGGAGAT TCAGGATGCG GAACGCAAGG TCGGCAGTCC GGATATATGG
GGCTATGCCT GGCAGGGCCG GAGCTATGAG GGCCTGACCT GCGATGCGCT GGAGTGGATC
GCTTCGGCCG GCGGCGGCAC GATCCTTTCC GACGACGGAG AGGTGACAAT CAACAATCCC
AAGACGGAGG CGGCTTTGAG CCGTGCGCGC GGCTGGATCG GGACGATTTC GCCTGAGGGG
GTTCTGAACT ACGATGAGGA AAACTCGCGT GCCCTCTTCG AGAGCGGCAA TGCCGTCTTT
CACCGGAACT GGCCTTATGT GTGGGGAACG TCGCAGGCCG AAGGCGGCAA GCTCGTCGGC
AAGGTCGGGG TGAGCGCGCT TCCGGTGGGT GCGGAAGGCC AGAAGTCGAG CGGTGCGCTC
GGTACCGCCT ATCTCGGCGT TTCCAAATAT TCCAAGAATC CGGAGCTTGC AGCGGAGCTG
CTGCGCTACA TGGTAGGTGC GGAAGACCAG AAGATGCGTG CAATCGAAGG CGGCTACAAT
CCGACCGTGG AGGCGCTCTA CGAAGACGCC GATGTGCTGG CGAAGATTCC GTTCCTCGGC
ATGGCGAAGA CCGCGTTCGA AGAATCGGTC GCGCGTCCCT CGGCAGCCAC GGGCAAGAAC
TATAATCGTG TTTCCCGTAC CTTCTACCGG GCGGTTCACG ACATCATCTC CGGCAAGGAC
GATGTCGCGA AGGAACTCGC CGATCTCGAG CGACGCCTCG AACGCGACGT TAAAGCGAAA
TGA
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| Protein sequence | MKHLLKTLAG MTVIAVVSAF PAKADTVSMF CSATDYELCE KAVQKWTKET GHDVKLNRMP
QNLDDAIPIY QQLFAAQSTD MDVLYIDVIW LGMFKDHLLD LTSLVPEEEV KAHFASAADA
ARLDGKLLSM PFYIDTGLMF YRKDLLEKYG KQPPKTWDEL TATAKEIQDA ERKVGSPDIW
GYAWQGRSYE GLTCDALEWI ASAGGGTILS DDGEVTINNP KTEAALSRAR GWIGTISPEG
VLNYDEENSR ALFESGNAVF HRNWPYVWGT SQAEGGKLVG KVGVSALPVG AEGQKSSGAL
GTAYLGVSKY SKNPELAAEL LRYMVGAEDQ KMRAIEGGYN PTVEALYEDA DVLAKIPFLG
MAKTAFEESV ARPSAATGKN YNRVSRTFYR AVHDIISGKD DVAKELADLE RRLERDVKAK
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