Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4384 |
Symbol | |
ID | 5318354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 880905 |
End bp | 881360 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640776188 |
Product | hypothetical protein |
Protein accession | YP_001313121 |
Protein GI | 150376525 |
COG category | [S] Function unknown |
COG ID | [COG5478] Predicted small integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.941275 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAAAGG CCAATGGTTT CAGCAGGTTT GCCAGCGCGG TGGCGGAATA TGCCGGGCGC CCCGCCGTTT TCGTCCTTGC CCTTGCATTG ATAGGCGCCT GGGCAGTCAC AGGTCCGATC TTCGGTTTCT CCCAGACGTG GCAGCTCGTC GTCAATACCG GCACGACGAT CGTCACCTTT CTCATGGTTT TCGTCCTTCA GAACACGCAG AACCGGGACG GCCGGGCCCT TCAGGCAAAG CTCGACGAAC TCATCCTCAC CAGCTCGGCG GAGAACCGCT ATGTCGGAAT CGAAAAGCTG GATGAAAAAG AGCTTAAACG ACTGGCCGAG ATCCTCCGGA AACACGCCCA CGACCAGGAC GACGACGAAC TTCGGGAGAA GGTATCCAGC GCCGCGGAAC GCCGGGGTCT GGGAAGAGCT AATCGGAACC AAAACACGCG GCAGCCGTTT GCCTGA
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Protein sequence | MPKANGFSRF ASAVAEYAGR PAVFVLALAL IGAWAVTGPI FGFSQTWQLV VNTGTTIVTF LMVFVLQNTQ NRDGRALQAK LDELILTSSA ENRYVGIEKL DEKELKRLAE ILRKHAHDQD DDELREKVSS AAERRGLGRA NRNQNTRQPF A
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