Gene Smed_4384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4384 
Symbol 
ID5318354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp880905 
End bp881360 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content59% 
IMG OID640776188 
Producthypothetical protein 
Protein accessionYP_001313121 
Protein GI150376525 
COG category[S] Function unknown 
COG ID[COG5478] Predicted small integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.941275 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAAGG CCAATGGTTT CAGCAGGTTT GCCAGCGCGG TGGCGGAATA TGCCGGGCGC 
CCCGCCGTTT TCGTCCTTGC CCTTGCATTG ATAGGCGCCT GGGCAGTCAC AGGTCCGATC
TTCGGTTTCT CCCAGACGTG GCAGCTCGTC GTCAATACCG GCACGACGAT CGTCACCTTT
CTCATGGTTT TCGTCCTTCA GAACACGCAG AACCGGGACG GCCGGGCCCT TCAGGCAAAG
CTCGACGAAC TCATCCTCAC CAGCTCGGCG GAGAACCGCT ATGTCGGAAT CGAAAAGCTG
GATGAAAAAG AGCTTAAACG ACTGGCCGAG ATCCTCCGGA AACACGCCCA CGACCAGGAC
GACGACGAAC TTCGGGAGAA GGTATCCAGC GCCGCGGAAC GCCGGGGTCT GGGAAGAGCT
AATCGGAACC AAAACACGCG GCAGCCGTTT GCCTGA
 
Protein sequence
MPKANGFSRF ASAVAEYAGR PAVFVLALAL IGAWAVTGPI FGFSQTWQLV VNTGTTIVTF 
LMVFVLQNTQ NRDGRALQAK LDELILTSSA ENRYVGIEKL DEKELKRLAE ILRKHAHDQD
DDELREKVSS AAERRGLGRA NRNQNTRQPF A