Gene Smed_4365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4365 
Symbol 
ID5318388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp866921 
End bp867382 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content60% 
IMG OID640776169 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001313102 
Protein GI150376506 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGAA GAGCAGTCAG GGACTCGGCC GTTGCGAAAT ACACGCCTGA TGACCTGGAT 
CGCCAGATAA TTGCACATCT GCGCTCCGAC GGGCGGGCCT CGCTTTCCAA GCTCTCCGAT
GCGTTGGGCG TGGCGCGGGG CACAGTCCAA AATCGGCTGG AACGCCTGCT CGAGACCGGA
ACCCTCCTCG GATTCACCGT CCGGGTCAGG GAAGACTACG ACGTCAGCAC GGTTCATGCG
GTGATGATGA TCGAAGTGGT GGGGAAATCC ACGACGCAGG TCATCCGCAG GCTGCGCGGC
TTGCCCGAGA TCTATACGCT GCACACCACC AACGGCAACT GGGATCTGGT TGCCAACATC
CGTGCGGCCA ACCTCTCGGA GTTTGATCGC ATATTGCGCG AGGTGCGGAT GATCGATGGC
GTCGCCAACA GTGAAACCAG TCTCTTGTTG AGCAGCGTAT GA
 
Protein sequence
MSRRAVRDSA VAKYTPDDLD RQIIAHLRSD GRASLSKLSD ALGVARGTVQ NRLERLLETG 
TLLGFTVRVR EDYDVSTVHA VMMIEVVGKS TTQVIRRLRG LPEIYTLHTT NGNWDLVANI
RAANLSEFDR ILREVRMIDG VANSETSLLL SSV