| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4362 |
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| Symbol | |
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| ID | 5318385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 863884 |
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| End bp | 865005 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640776167 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001313100 |
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| Protein GI | 150376504 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTTT CGAGGGTATT GGCTGCAGTC CTTTCATGCG GGCTACTGGC GGCCGCCGAC
TTCGTCGTGG GAACCGCTGA TGCGCAACAG CCCCCTCCAG CCGTCACGGT GGCGCCGGCC
GCGGTCATGG ACCTGCGCGA AAGCGTCGAT CTGACCGGCA CGGTCGTGGC GATCCAGAAG
GTGGACATGC GCGCCCGCGT GTCCGGCTTC ATCGAAAAGG TTAACTTCGA GGATGGGCAG
AAGGTCTCCG CCGGAACCGC GCTTTACCAG GTGGAGGACG GCGCCTATCG CGCCGCCCTG
CAGGAGATCG AGGGTTCGAT AGCGGCGGCG GAGGCCCAGA GGGACCTTGC GATTCTCGAG
CGTGACCGCG CACAGCGGCT GATCGCAACC AACACGGTCG CTCAGGCGAC ACTCGACACG
GCGAACGCGC AGCTGAAAAA GGCCGAGGCC GATATATTGC GTCTCAAGGG CAGCAAGCAG
ACGGCCGAAC TCAACCTTTC CTATACCAAA ATCCTCGCGC CTTTCGATGG TGTCGTCGGC
CTCACCGCCG TCGATGTCGG CGCCCTCGTT ACCCCCGAAA GCGGAACTCT CGTCACGTTG
ACGCGCCTCG ATCCGATCCA TGCGGAATTT CCAGTCGCGA CCTCGCTTTA CTTCTCCTAC
CGGGAACGCG TGGAAAAAGG TGAGATCTCC GGCGGCGCCA ATGTCAGCAT CGTCCTTCCT
AACGGCACCG AGTACCCACA AAAAGGCACC ATCGATTTCG TCGCCAGCAC CGTCTCCCAG
GGCACCGACA CCGTCACCGT GCGCGCCCAG TTTCCCAATC CGGGCGGGGT CCTCCTCGAC
GGCACACTCG TCAGGGTCGT TCTCGAGCAG TCCGACCGGC AGGACGTGCT CGCGGTCCCG
CAGCAGGCGG TGCAGCGCGA TCAGCAGGGT GCATTCGTCA TGGTGGTCGA CGCCAACTCC
AAGGTGGAGC TTCGCCGGGT AGAGGTCAGT CGATCCAGCC GCGGTCAGGC CGTCGTCGCC
AAGGGGTTGA AGGAGGGCGA GAACGTCATC ACGGAAGGTG TCGGCAAGGT GCGGCCGGGG
ATTACCGTAG ATGCCGTCAC GGCCACGACG ACGGGCGGCT GA
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| Protein sequence | MRVSRVLAAV LSCGLLAAAD FVVGTADAQQ PPPAVTVAPA AVMDLRESVD LTGTVVAIQK
VDMRARVSGF IEKVNFEDGQ KVSAGTALYQ VEDGAYRAAL QEIEGSIAAA EAQRDLAILE
RDRAQRLIAT NTVAQATLDT ANAQLKKAEA DILRLKGSKQ TAELNLSYTK ILAPFDGVVG
LTAVDVGALV TPESGTLVTL TRLDPIHAEF PVATSLYFSY RERVEKGEIS GGANVSIVLP
NGTEYPQKGT IDFVASTVSQ GTDTVTVRAQ FPNPGGVLLD GTLVRVVLEQ SDRQDVLAVP
QQAVQRDQQG AFVMVVDANS KVELRRVEVS RSSRGQAVVA KGLKEGENVI TEGVGKVRPG
ITVDAVTATT TGG
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