Gene Smed_4360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4360 
Symbol 
ID5318383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp858522 
End bp860681 
Gene Length2160 bp 
Protein Length719 aa 
Translation table11 
GC content64% 
IMG OID640776165 
Producthypothetical protein 
Protein accessionYP_001313098 
Protein GI150376502 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAGAT GTTTGCTGGT GGCGGCCCTG CTTTGCACGT GGTTCCCGGA CGCGGGCGCC 
TCAGACCAGT GGGTGCCCGT CCGCGATGTC TCACTCGAAC TTCGCACCGG CAGCCCCCTC
GATTTTTCAT CCTTGCTGCC GAATGCCGCG ATCGTTGCGG ATCGGCGAAT CGTTGCTGGT
CCGGGCGGCC GGCTGGCCTT TGCCGAGGCT CCGGAAAAGC CGGTCAGAAT GCTGTGCGCT
TCGCTCGCCT GGAGCCCCGC TTCCGGCGGT TTCCCGGATC ACGAGGCCGC CGACCGCTAC
GCCCGCCAAT TGGCGATGCA CGGCTACAAC ATCGCCCGGC TGCATTTCGT CGATGCGAGC
CTGATGTTCG GCCGGCAGAG GGACTTCGAT TTCGATCCCG AGACGCTCGA CCGCGTCCAC
TACCTGCTGG CGGCGTTGAA GCGCCACGGA ATCTACTGGA TTATCGACGG GCTGTCGTCG
TCCCGCGGCG CCTATGGCGG CTATGACGAC CGCTGGGACG CCCACGGAGA TCTCAAGCTC
GGGCTGCACC TGGACCGTGA TGCAATTGCG CATTGGCGCG TTCTGCAAGA GAAGTTCCTG
TCGCGCGTCA ATCCCTATAC CGGGACGGCA ACCATCCGGG ACGACGCGCT CGCGCTCGTG
ATCCTTGCCA ATGAAAACGG CATCGAGTTC GACAGCGTCG TGCATGAGCG GCCCGAAAGG
CCCGGCTATG ATGAGGCACT GTCCGGACCT TTCAACCGTT GGCTTTTGTC GCGCTACGGG
TCGACGGAGG CGCTCGCGCG CGTCTGGGGC GTTCTCGACG CCGGCGAGCG GCTCGAAACC
GCATCGGTGA GGCTCCCCGC CAACCGCTAT GCGGACGAAC CACGGATGCG CGATCTGCAA
GCCTTCTTTG TAGAGACGGA ACGCGCCTCC ACCCTGCGCA TGAGCAAAGT CCTGCGCGAT
CTCGGCTATC GCGGCCTGAT CAGCACCTAC AACAACTGGC CGACGGTGCA GACGGCCCTC
AGCCGCCGCG ATCTCGATGC CGTCACGATG AACACCTATC ACGACTGGGT CGGCGGCTAT
TCTCCCGGAA GCGCACAGAC GCAGGACAGC TCGCTTGCCG GCGGCGCCAA CTACATGCGC
ATGATCGCCG CGGCGCGATG GCTCGGCAAA CCCTTTATCG TCAGCGAATA CGACCATCTT
TTCTGGAACC GCTATCGTTA CGAGGCAGGA CTGGCAATGC CGGCCTACGC TGCGCTCCAG
GGGTGGGACG TGCTCTGCCG GCACGGCCAC GGGCCGATCG CGCTCGCCTA TGGCGAACCC
TTTGCGCACA AGAGGGCGAT GCTGCCCTAT GCGATTGCTC TGGACCCGGT GGCGCGTGCC
GGCGAGACGC TCAGCGCACT TTTGTTTCGC CGCGGAGACG TCGCGACCTC GGCGCTCACC
ATTCCCTTCG CCGTTCGGGG GGAGGAGGAT CTCAGCGACG ACATGCAGGC GCGTGAGCCG
GAAAACCTGA CGGATCTTGC GCTCGTCGGG CGCATCGGCC TGCTTCCGGT AAACGGTTTT
GACCGCGAAA CAGGCGTCTC GCAACCACGT GAGCAGGACG CCGGAACAAT TCTCGCAGCG
CTTCGCGACC ATGCTGCGCT CGCGGCTGAA AACCGGACCG ATGTCGCGAG CGGACTTTAC
GAAAGCGAAA CGGGGCAGAT CCTGCTCGAC CGCCGGATCG GACAGCTCCG TGTCTCGGCT
TCCGCAACGG AAGCTGCAGC CTTCTCCTCT TTGCGCGAGC CGATCGAGCT CGGTTTCATG
CGCATCGCAC AGGCGGACGG AAACGGGCTT GTGGCGATCT CGGCCATCGA CGCCGAGCGC
ACTCTTTCGC AAAGCCGGCG TCTGCTGCTG ATCTTTGCGA CCGATGCCCA GAACAGCAAC
ATGGTCTTTC GCGACAGTGA TGAGAAGGTG ATCGAGGACT TCGGCGAGTT GCCGGTAAGA
ATTCGAAAAA ACTATGTCGA CCTCGAATTG TCGCGGACCG CCGGCAAATG GAGCGTGTCA
CCGGTCGGCC TCGACGGCAC CGTCTACCCG CCCGTGGACA GGGGCAGCGG GCGCGTCGCT
TTCCGTCTCT CGAACGATAC GCCCTACGGG CCGACCACCT ATTTTCTCGT GGAGATGTAG
 
Protein sequence
MRRCLLVAAL LCTWFPDAGA SDQWVPVRDV SLELRTGSPL DFSSLLPNAA IVADRRIVAG 
PGGRLAFAEA PEKPVRMLCA SLAWSPASGG FPDHEAADRY ARQLAMHGYN IARLHFVDAS
LMFGRQRDFD FDPETLDRVH YLLAALKRHG IYWIIDGLSS SRGAYGGYDD RWDAHGDLKL
GLHLDRDAIA HWRVLQEKFL SRVNPYTGTA TIRDDALALV ILANENGIEF DSVVHERPER
PGYDEALSGP FNRWLLSRYG STEALARVWG VLDAGERLET ASVRLPANRY ADEPRMRDLQ
AFFVETERAS TLRMSKVLRD LGYRGLISTY NNWPTVQTAL SRRDLDAVTM NTYHDWVGGY
SPGSAQTQDS SLAGGANYMR MIAAARWLGK PFIVSEYDHL FWNRYRYEAG LAMPAYAALQ
GWDVLCRHGH GPIALAYGEP FAHKRAMLPY AIALDPVARA GETLSALLFR RGDVATSALT
IPFAVRGEED LSDDMQAREP ENLTDLALVG RIGLLPVNGF DRETGVSQPR EQDAGTILAA
LRDHAALAAE NRTDVASGLY ESETGQILLD RRIGQLRVSA SATEAAAFSS LREPIELGFM
RIAQADGNGL VAISAIDAER TLSQSRRLLL IFATDAQNSN MVFRDSDEKV IEDFGELPVR
IRKNYVDLEL SRTAGKWSVS PVGLDGTVYP PVDRGSGRVA FRLSNDTPYG PTTYFLVEM