| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4326 |
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| Symbol | |
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| ID | 5319175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 823752 |
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| End bp | 824528 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640776131 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001313064 |
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| Protein GI | 150376468 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0814456 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGCAGG CGAATGGCTC GGGTGACGGC AAGATCGCAC TGGTCACGGG CGGCGGCACC
GGTGTCGGCC GCGGCATTGC CGAGGCCTTG AGCGCCGAGG GCTACAGCAT CGTCGTCACC
GGCCGCCGCC CGGATGTGCT CGATGCCGCG GCCGCCGAAA TCGCGGGGCG AACCGGCGGT
ACCGTCCGCG CGATCGTCTG CGATGTCGGC AATCCGGATC AGGTCGCGGA CCTCTTCGCA
GCCGTCCGGA CGGAATTCGG CCGGCTGGAC CTGCTCGTCA ACAATGCCGG CTCGAACGTA
CCCCCCGTGC CTCTCGAAGA GGTGACCTTC AAACAGTGGA ACGGCATCGT CGCCGCGAAC
CTGACGGGGG CCTTTCTCTG CACCCAACAC GCCTTTCGGC TGATGAAGAC GCAAACCCCG
CGCGGAGGAC GGATCATCAA CAACGGCTCG ATCTCTGCGC AGACGCCCCG GCCCAACTCG
GCGCCCTATA CCGCGACCAA ACACGCCATT ACCGGCCTCA CCAAGTCGAC GGCGCTCGAT
GGCCGGATGC ACGACGTCGC CTGCGGCCAG ATCGACATAG GCAATGCCGC CACCGACATG
ACCGCAAGAA TGAGCACCGG CGTGCTGCAG GCCAATGGCG AAGTCGCAGC GGAGCCGACG
ATTCCGATCG GGCACATTGC CGATGCAGTC GTCTACATGG CGAGCCTGCC GCTCTCGGCC
AATGTTCTCA CGATGACGGT AATGGCAACC AAGATGCCGC TGGTCGGCCG CGGATAA
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| Protein sequence | MAQANGSGDG KIALVTGGGT GVGRGIAEAL SAEGYSIVVT GRRPDVLDAA AAEIAGRTGG
TVRAIVCDVG NPDQVADLFA AVRTEFGRLD LLVNNAGSNV PPVPLEEVTF KQWNGIVAAN
LTGAFLCTQH AFRLMKTQTP RGGRIINNGS ISAQTPRPNS APYTATKHAI TGLTKSTALD
GRMHDVACGQ IDIGNAATDM TARMSTGVLQ ANGEVAAEPT IPIGHIADAV VYMASLPLSA
NVLTMTVMAT KMPLVGRG
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