| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4280 |
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| Symbol | |
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| ID | 5319116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 771438 |
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| End bp | 773033 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640776085 |
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| Product | transcriptional regulator domain-containing protein |
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| Protein accession | YP_001313018 |
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| Protein GI | 150376422 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5616] Predicted integral membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAATTCA TGTTTGCAGA CTATGTACTT GACCGGGAGC GCCGGGAACT GACCCTACGT
GGGCAGGTCG TGTCCGTCGG ACCGCAGGTC TTCGACCTGT TGCTCCATCT GGTCGGCACG
CGCGACCGCG TCGTCAGCAA GGACGAGTTG CTGCAGGCGG TGTGGGGCGG GCGGATCGTC
TCGGAATCAA CGATCACAAG CCACATCAAC GCGGTGCGTA AAGCAATCGG CGACACCGGC
GGAGAACAGC GCCTGGTCCG GACGGTCGCC CGCAAGGGCT TCCGTTTCGT CGGCGACATC
AGGATCGCCG ACAGCGCAGA AGCGCGGCAG CCCGGCGGGC CAGGCAGCGC CGGGCATACA
TCCTTAGGAT CGAAGGAGCC GCCGCCCGCG CTCGCCCTTC CGGACAAACC CTCCATCACC
GTCCTGCCAT TCCAGAACCT CAGCGGCGAT GCGGATCAGG ATTATTTTGC CGATGGGGTG
GTGGAGGATA TCATCACCGC CCTCTCGCGC ATCCGCTGGC TGTTCGTCAT CGCGCGCAAT
TCCAGCTTCA CCTACAAAGG GCGCGAGGTG GACTTGAAGG AAGTCGGCCA GGAGCTCGGC
GTTCGCTACG TACTGGAAGG CAGCGTCCGC AAGGCCGGGA ACAGAGTGCG CATCACCGGA
CAGCTCATCG ACGCAACGGC CGGAACGCAT CTGTGGGCGG AGCGCTTCGA GGGCACGCTC
GACGATATTT TCGAATTGCA GGACAGAGTT GCCGAGAGCG TCGTCGGCGC GATCGCACCG
CAGCTCGAGC GGGCGGAAAT CGAGCGTGCC AAGCGGAAGC CGACCGGGAG CCTGGACGCC
TACGACTATT ACTTGCGCGG CATGGCACAC CTGCATAACG GAACCCGCGA AGCAATCGAA
GCAGCGCTGC CCTTGTTCTA CAAGGCGATC GAGCTCGATC CCGATTTTGC GTCCGCCTAT
GCCGGGGCGG CCTGGTGCTA TTTCTGGCGC AAGTTGAACG GCTGGATGAT CCACCGTGCT
CAAGAGATAG CCGAGGGCGC GCGCCTGGCG CGGCTGGCAG TGGAACTCGG TCGTGATGAT
GCCGTGGCGC TGACGAGGAG CGGGCACGCA CTCGGCCATC TCGTCGGCGA CCTGGACGGC
GGAATTGCGC TTATCGACAG GGCACGGCTG CTGAACCCGA ACCTCGCTCC GGCATGGTTT
CTTGGCGGCT TCCTGCGCGT TTTCCGAGGC GAACCGGAGA GCGCGATCGA ACATATCGAG
CGCGCCGCCC GCCTAAGCCC GCTGGACCAG GAAATGTTCC GGATGCAGGC CGGAACCGCG
CTCGCGCATT TCTTCGCCGG CCGCTTCGAT CTCGCCTCCG CCTGGGCAGA AAGAGCGCTG
GGGAACCTTC CCAGCCTGCT GGTTGCGGTC GCGCTGGTGG CTGCGAGCCA TGCGCTGGCG
GGGCGCAATG AGGAGGCACG TCTGGCGATG CGGCGCCTGC GCGCGCTCGA TCCCTCCTTG
CGTGTATCCA ATCTCCGGGA CTGGCTGCCG ATCCAGCGCC AAGAAGATTT CGCGCGGTTC
GCAGACGGAT TGCGGCTTGC CGGGATGCCG GAGTGA
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| Protein sequence | MQFMFADYVL DRERRELTLR GQVVSVGPQV FDLLLHLVGT RDRVVSKDEL LQAVWGGRIV
SESTITSHIN AVRKAIGDTG GEQRLVRTVA RKGFRFVGDI RIADSAEARQ PGGPGSAGHT
SLGSKEPPPA LALPDKPSIT VLPFQNLSGD ADQDYFADGV VEDIITALSR IRWLFVIARN
SSFTYKGREV DLKEVGQELG VRYVLEGSVR KAGNRVRITG QLIDATAGTH LWAERFEGTL
DDIFELQDRV AESVVGAIAP QLERAEIERA KRKPTGSLDA YDYYLRGMAH LHNGTREAIE
AALPLFYKAI ELDPDFASAY AGAAWCYFWR KLNGWMIHRA QEIAEGARLA RLAVELGRDD
AVALTRSGHA LGHLVGDLDG GIALIDRARL LNPNLAPAWF LGGFLRVFRG EPESAIEHIE
RAARLSPLDQ EMFRMQAGTA LAHFFAGRFD LASAWAERAL GNLPSLLVAV ALVAASHALA
GRNEEARLAM RRLRALDPSL RVSNLRDWLP IQRQEDFARF ADGLRLAGMP E
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