Gene Smed_4277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4277 
Symbol 
ID5319039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp767306 
End bp767767 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content58% 
IMG OID640776082 
ProductPEBP family protein 
Protein accessionYP_001313015 
Protein GI150376419 
COG category[R] General function prediction only 
COG ID[COG1881] Phospholipid-binding protein 
TIGRFAM ID[TIGR00481] Raf kinase inhibitor-like protein, YbhB/YbcL family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.246525 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTCA GTCTGATCAG TCCCGTATTC GCCGACGGCC AGCCTATACC GCAGAAATAC 
ACTCGTTTTG GCGAAAACCT TTTCCCGCCG TTGAAATGGA CGGGTACGCC GGACGGAACG
CAGAGCTTCG CATTGATTAT CGAGGATCCG GATGCGGTAA GCGGGCTGTT TCGCCATTGC
GGGATCATCA ACATTCCAGG CCATTGGACC GAACTTCCAA AAGCCGTCGA TACCGGGCCT
GAACGCGGGA TCAAGTTCAT CAAGAACGAT TTCGGAAATG CCCGTTACGA TGGGCCGCAG
CCGCCCGTCG GAACGGGCGT CCACCGGTAT CGCTTCAGGC TTGCCGCGCT CGATATCGCC
AATCTCTCGA TTCCGGAAGA TGTGGGTGCC GCGGAGGCGT GGGAGAGAGC CTGCAAGCAC
CTCATCGGCG AAGCGGAGAT TGTCGGCACC TATGGAAGCT AG
 
Protein sequence
MTFSLISPVF ADGQPIPQKY TRFGENLFPP LKWTGTPDGT QSFALIIEDP DAVSGLFRHC 
GIINIPGHWT ELPKAVDTGP ERGIKFIKND FGNARYDGPQ PPVGTGVHRY RFRLAALDIA
NLSIPEDVGA AEAWERACKH LIGEAEIVGT YGS