| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4227 |
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| Symbol | |
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| ID | 5319301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 710118 |
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| End bp | 711059 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640776032 |
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| Product | xylose isomerase domain-containing protein |
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| Protein accession | YP_001312965 |
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| Protein GI | 150376369 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.220336 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCCGC GCAAATGGAA CCGTGATAAC TGGCCGATTG CGGCCGCTAT GATCCAGTAC
CCCAAGCTTT TGCCAGATGG CCGATCGGTG CAGGACCAGT CGGTGGAGGA GTGGGCGGCG
ACGCTCGCCG ACGTCGTCGA TGCCGGCTTC ACCGAACTGG ACCCGACCGA CAGCTGGATA
CGGCTGGCGG ACCTTTCGGC GGAACGGCTT GACCAGTTCG TTAAGCTTTC ACGGTCTCTT
GGCCTCAATA TCACGGCGAT CTCCACCTCT CGGCGCAGCC TCATAGACCC GGAACATGGC
GCGGAATATC TTGCCTATGG ACACCGGGTC ATCGAGGCGG CCGCCGCCGT AGGTGCCGGC
TCCGTGTCCT TCGGCTTCTT CGGCCCGCTG ACGGAGGCGC AGAAGAAGGT GCTCTGGTTC
TGGACGGTCG ACGGGGTGAA GAACCCCGAC GATGCGGGGA CCTGGCAGTT GGCGGTCTCG
CGCGTTCGCG AACTCGGACG CCATGCCGAA GAACTCGGCG TCGAAGTCTC GCTGGAGATG
TATGAGGACA CCTATCTGGG CACGGCCGAC AGTTCCGTTC GCTTCGTCGA GGAGGTCGGC
CTGGCCAATG TCGGCATCAA TGCCGATCTC GGAAATCTCA TTCGCCTGCA CCGGCCCGTG
GAACATTGGC AGGAAATGAT GGCAAAGGTT GCGCCTTTCG CCAAATACTG GCACGTCAAG
AATTACAACC GCACGGAAGA TCCGGCATCG GGCGTCATCA TCACCCATCC GGCTCCGCTC
GAATTCGGTC TCATCAACTA TCGGGCGGCG ATCAGAATGG CGCTGGCGCA TGGCTTCGAC
AGCCCCTTCC TCTGCGAGCA TTACGGGGGA GACGGACTCT CCGTCAGCGC CGCCAACCGC
GATTATCTGA GGCGCATACT GCCTCGCCAA GAAGGACATT GA
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| Protein sequence | MAPRKWNRDN WPIAAAMIQY PKLLPDGRSV QDQSVEEWAA TLADVVDAGF TELDPTDSWI
RLADLSAERL DQFVKLSRSL GLNITAISTS RRSLIDPEHG AEYLAYGHRV IEAAAAVGAG
SVSFGFFGPL TEAQKKVLWF WTVDGVKNPD DAGTWQLAVS RVRELGRHAE ELGVEVSLEM
YEDTYLGTAD SSVRFVEEVG LANVGINADL GNLIRLHRPV EHWQEMMAKV APFAKYWHVK
NYNRTEDPAS GVIITHPAPL EFGLINYRAA IRMALAHGFD SPFLCEHYGG DGLSVSAANR
DYLRRILPRQ EGH
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